Results for "command-line"
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List of Bioinformatics and Computational Biology Journals
Hi Bioinformatician and Computational Biologist, this is the comprehensive list of all (?) the bioinformatics and computational biology journals. Please update me if...3772 days ago
Best book Titles for Learning Bionformatics
Nothing can add to our intellect more than reading a book. In books, we can experience new things that we would not normally be able to experience. It is proved that...3962 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
..., BMC Bioinformatics 11(Suppl 12):S1, 2010 Full Text Links to Linux command-line tutorials and resources Tuto...oper's Advanced Bash Shell-Scripting Guide Tutorials for sed, the command-line stream editor A tutorial a...3823 days ago
List of In-silico Binding Site Prediction Tools
Following are the list of In-silico Binding Site Prediction in Proteins tools CASTp : http://sts.bioengr.uic.edu/castp/ Computed Atlas of Surface Topography of prot...3788 days ago
Perl one-liner for bioinformatician !!!
...-oneliners-for.html http://genomespot.blogspot.com/2013/08/a-selection-of-useful-bash-one-liners.html http://biowize.wordpress.com/2012/06/15/command-line-magic-for-your-gene-annotatio...3672 days ago
- Subprocess is one of simplest way of running linux command from within python code Example: if you want to run fastqc for QC of fastq file: from subprocess import Popen...
3593 days ago
- Reformat is a member of the BBMap/BBTools package. It is a multipurpose tool designed for converting reads or other nucleotide data between different formats. It supports,...
2758 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...SRA and other NCBI resources; command-line or via web, can fetch data fr...glfMultiples Description: command-line, variant caller Input: GLF...: SAM RVD Description: command-line program, detection of rare SN...ion ANNOVAR Description: command-line tool, supports SNPs, INDELs,...2953 days ago
Tools for Searching Repeats And Palindromic Sequences
What are genomic interspersed repeats? In the mid 1960's scientists discovered that many genomes contain stretches of highly repetitive DNA sequences ( see Reassociation...2255 days ago
- Linux Commands Cheat Sheet File System ls — list items in current directory ls -l — list items in current...
2918 days ago
