Hi Bioinformatician and Computational Biologist, this is the comprehensive list of all (?) the bioinformatics and computational biology journals. Please update me if you know any other good journals related with our domains. Feel free to add your comments and suggestions. You comments will be helpful for others...
*The journals are not listed in any ascending, descending, or impact factors oders.
Journal of Computational Biology
Protein Engineering
Proceedings of the National Academy of Sciences
Folding and Design
Journal of Biomedical Informatics
Journal of Computational Intelligence in Bioinformatics
Journal of Structural and Functional Genomics
Journal of Molecular Graphics and Modelling
Computers & Chemistry
Artificial Intelligence in Medicine
Applied Bioinformatics
Applied Genomics and Proteomics
Online Journal of Bioinformatics (OJB)
Bioinformatics: Information Technology & Systems (BITS)
Data Mining and Knowledge Discovery
The EMBO Journal
Current Opinions in Structural Biology
Journal of Molecular Microbiology and Biotechnology
Nature Structural Biology
Journal of Machine Learning Research
Current Opinion in Genetics & Development
Trends in Biochemical Sciences
Proteins: Structure, Function, and Genetics
Trends in Genetics
Trends in Molecular Medicine
Journal of Molecular Modelling
Trends in Pharmacological Sciences
Drug Discovery Today
Comments
This frontiersin a new journal also provide a good option for publishing your research work http://www.frontiersin.org/
Thanks for the extensive list, I also have local list of journals. I paste here for the bioinformatics community. Hope helpful.
Advances and Applications in Bioinformatics and Chemistry
Advances in Bioinformatics
Algorithms for Molecular Biology
Asian-Australasian Journal of Animal Sciences
BBA - Proteins and Proteomics
BioData Mining
Biofrontiers
Bioinformatics
Bioinformation
BMC Bioinformatics
BMC Genomics
BMC Systems Biology
Briefings in Bioinformatics
BMC Research Notes
Bulletin of Mathematical Biology
Cancer Informatics
Comparative and Functional Genomics
Comparative Biochemistry and Physiology - Part D: Genomics and Proteomics
Computational Biology and Chemistry
Computers in Biology and Medicine
Current Bioinformatics
EURASIP Journal on Bioinformatics and Systems Biology
Evolutionary Bioinformatics
Evolutionary Computation
Genome Biology
Genome Informatics
Genome Medicine
Genome Research
Genomics
Genomics, Proteomics & Bioinformatics
IEEE/ACM Transactions on Computational Biology and Bioinformatics
IEEE Transactions on Evolutionary Computation
In Silico Biology
IET Systems Biology
International Journal of Bioinformatics Research and Applications
International Journal of Biomathematics (IJB)
International Journal of Computational Biology and Drug Design
International Journal of Data Mining and Bioinformatics
International Journal of Functional Informatics and Personalized Medicine
International Journal of Genomics
International Journal of Knowledge Discovery in Bioinformatics
International Journal of Medical Informatics
Journal of Bioinformatics and Computational Biology
Journal of Biological Systems
Journal of Biomedical Informatics
Journal of Biomedical Semantics
Journal of Computational Biology
Journal of Computational Neuroscience
Journal of Computer-Aided Molecular Design
Journal of Integrative Bioinformatics
Journal of Mathematical Biology
Journal of Theoretical Biology
Mammalian Genome
Mathematical Biosciences
Mathematical Biosciences and Engineering
Methods and Cases in Computational, Mathematical and Statistical Biology
Molecular & Cellular Proteomics
Molecular Systems Biology
Neuroinformatics
Pharmacogenetics and Genomics
Physiological Genomics
PLoS Computational Biology
Proteins: Structure, Function, and Bioinformatics
Source Code for Biology and Medicine
Statistical Applications in Genetics and Molecular Biology
Statistical Methods in Medical Research
The International Journal of High Performance Computing Applications
The Open Applied Informatics Journal
The Open Bioinformatics Journal
Theoretical Biology and Medical Modelling
Journal of Biosciences https://link.springer.com/journal/12038, Also accept bioinformatics and methodologies papers
impact factor: ~1.5
Algorithms for Molecular Biology https://almob.biomedcentral.com/ accept bioinformatics papers
Following are the list of Springer bioinformatics journals https://link.springer.com/search?query=bioinformatics&facet-content-type=%22Journal%22
Method journals also published bioinformatics research papers http://www.sciencedirect.com/science/journal/10462023
BioData Mining Journals also accept/publish bioinformatics tools https://biodatamining.biomedcentral.com/
Biology direct also accept bioinformatics related research https://biologydirect.biomedcentral.com/
International Journal of Biometrics and Bioinformatics accept Bioinformatics research articles. Impact 1.18 http://www.cscjournals.org/journals/IJBB/description.php
Publish scripts at The Journal of Open Source Software http://joss.theoj.org/about
You can also bioinformatics tools at https://www.journals.elsevier.com/information-and-software-technology/short-communications/information-and-software-technology-now-publishing-short-com
Application in plant sciences accept tools and software https://bsapubs.onlinelibrary.wiley.com/journal/21680450