Results for "Mate"

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  • Genome Assembly Tools and Software - PART2 !!

    ...logenetic tree into account to estimate a possible ordering of the co...hm to assemble transcripts and estimate their expression levels from...e information of paired-end and/or matepair data, SSPACE is able to a...rs to clean sequence data from automated DNA sequencers prior to sequ...

    2728 days ago

Top-level pages

  • NGS Glossary !!

    ...probability that your sample contains a homozygous mutation of G to A. mate-pair: in paired-end sequencin...ends which are sequenced form a pair, and are frequently referred to as mate-pairs. QNAME: unique identif...

    2911 days ago

  • Genome Assembly Tools and Software - PART1 !!

    ...ems in functional genomics. Rnnotator is an automated software pipeline that gener...om metagenomic data FGAP 1.8.1 – Automated Gap Closing tool FGAP aim...ed with several special algorithms.MAP uses the mate pair information, resulting i...

    2728 days ago

  • +1 more Top-level pages

Wire posts

  • Understanding Paired End and Mate pair reads http://www.biorigami.com/wp-content/uploads/2012/02/PAIREDEND-MATEPAIR.pdf #Reads #Mate #Pairs #PE #Reads #MatePair

    2095 days ago

Bio-Scripts

  • Fastq-dump for SRA download

    ..."chr1" or "1"). "from" and "to" are 1-based coordinates --matepair-distance Filter by distance between matepairs....

    2168 days ago

  • Downloading GATK !

    ...mented copy-ratio and minor-allele-fraction estimates PostprocessGermlineCNVC...etrics (Picard) (BETA Tool) (Experimental) Estimates the rate of independent repl...ile by applying one of several filters. FixMateInformation (Picard)...

    2117 days ago

  • +2 more Bio-Scripts

Comments

  • Comment on "RACA: Reference-Assisted Chromosome Assembly"

    ...hromosomes from genome contigs or scaffolds using their alignments to a reference genome of a closely related species. Chromosomer does not require mate-pair libraries and it offers...

    2813 days ago

  • Comment on "Platanus"

    ...termined according to paired-end (mate-pair) data and constructs sca...---------- Map paired-end (mate-pair) reads on contigs, deter...see "***** NOTE ***** Paired-end (Mate-pair) input" below O...Outward-pair data (often called "Mate-pair", accepted in options "-...

    2841 days ago