Results for "Make"

Bio-Scripts

  • Installing Porechop on Ubuntu !

    ...rechop/__init__.py -> build/lib/porechop Cleaning previous compilation: make clean rm -f porechop/src/adapter_align.o porechop/src/alignment.o Compiling Porechop: make -j 8 g++ -std=c++14 -Iporech...

    2124 days ago

  • Install Python locally on shared Linux server !

    ...ython -type d | xargs chmod 0755 cd Python-2.7.11 #Then I compiled the source following its guideline ./configure --prefix=$HOME/python make && make install #Notice the prefix...

    2116 days ago

  • Downloading GATK !

    ...tion table CreateSomaticPanelOfNormals (BETA Tool) Make a panel of normals for use wi...Lifts over a VCF file from one reference build to another. MakeSitesOnlyVcf (Picard)...

    2093 days ago

  • Perl script to reverse complement a DNA sequence !

    ...WRONG:\n\n"; print "$revcom\n"; print "\nThat was a bad algorithm, and the reverse complement was wrong!\n"; print "Try again ... \n\n"; # Make a new copy of the DNA (see wh...

    2061 days ago

  • Installing pb-assembly on Linux !

    ...libtool/2.4.6-foss-2016b Automake/1.14-GCC-4.8.2...makedepend/1.0.5-foss-2016a bzip2...y that PacBio strives for, we make no warranty regarding any...y that PacBio strives for, we make no warranty regarding any...

    2052 days ago

  • Test bp-assembly !

    ...N-examples/.git/git-sym-local/links' -> in dir '/home/users/j/n/jnarayan/FALCON-examples/.git/git-sym-local/cache' make -j -f /home/users/j/n/jnarayan/FALCON-examples/git-sym.makefile 'greg200k-sv2.2' curl -L...

    2052 days ago

  • Installing nupack3.0.6

    ...➜ nupack3.0.6 git:(master) ✗ make make -C src/ make[1]: Entering di...ib/libutils.a utils.o hash.o make[2]: Leaving directory '/home/...../../../src/shared/utils.o make[2]: Leaving directory '/home/.../libutils.a -L../../../lib make[2]: Leaving directory '/home/...

    2044 days ago

  • Install HTSLIB on Ubuntu !

    ...ar.bz2 htslib-1.9/ htslib-1.9/INSTALL htslib-1.9/LICENSE htslib-1.9/Makefile htslib-1.9/NEWS htslib-...x.1 bgzip.1 hfile_s3.c m4 tabix.c bgzip.c hts.c Makefile tbx.c config.h.in...

    2037 days ago

  • Installing Platypus on Ubuntu !

    ...it:(master) ls Dockerfile extensions LICENSE Makefile misc README.md release...7-3ubuntu1) ... ➜ htslib-1.9 git:(master) ✗ make install zsh: correct 'instal...‘/usr/local/share/man/man5’: Permission denied Makefile:447: recipe for target 'i...

    2037 days ago

  • Setting up falconUnzip conda environments for genome assembly !

    ...ses on Bioconda live up to the # # quality that PacBio strives for, we make no warranty regarding any...# # We make no warranty that any such iss...

    2008 days ago