Parse the NCBI taxonomy database with Perl !
...-nodesfile=> "taxdump/nodes.dmp", -namesfile=> "taxdump/names.dmp"); #to check #parseTax('homo_sapiens', 'metazoa'); #exit; #m...1230 days ago
Perl script to check perl modules and download NCBI, BUSCO, Taonomy, Silva databases !
...SIX', 'Tie::File', 'Try::Tiny', 'Data::Dumper', 'File::Basename', 'Bio::SeqIO', 'FindBin', 'File::Remove', 'Capture::Tiny', 'File::Temp'...1218 days ago
1216 days ago
Perl script to check modules installed !
...SIX', 'Tie::File', 'Try::Tiny', 'Data::Dumper', 'File::Basename', 'Bio::SeqIO', 'FindBin', 'File::Remove', 'Capture::Tiny', 'File::Temp'...1213 days ago
Install htop in elementary/Ubuntu OS !
neelam@neelam-Lenovo-ideapad-320-15ISK:~$ sudo apt-get install htop Reading package lists... D...-0 libllvm6.0 libwayland-egl1-mesa Use 'sudo apt autoremove' to remove them....180207.2-0ubuntu1) ... Rebuilding /usr/share/applications/bamf-2.index... Pr...1210 days ago
R script to visualize fastANI core-genome comparison
####### # Purpose: Visualize fastANI core-genome comparison # Usage: Rscript # Output: .pdf # Uses genoPlotR package: http://genoplotr.r-forge.r-project.org...1159 days ago
1112 days ago
1112 days ago
1112 days ago
1112 days ago