Results for "C"
Bio-Scripts
...s/annotated$ sudo apt install vcftools [sudo] password for jit: Reading package lists... Done Building d...n... Done The following NEW packages will be installed: vc...1,459 kB of additional disk space will be used. Get:1 http://...up vcftools (0.1.15-1) ... Processing triggers for man-db (2....1577 days ago
- ...ain. [sudo] password for jit: Reading package lists... Done Building dependency tree Reading state i...0 not upgraded. Need to get 80.0 kB of archives. After this operation,...unpack .../htop_2.1.0-3_amd64.deb ... Unpacking htop (2.1.0-3) ... Setti...
1577 days ago
- library(vcfR) vcf_file
1577 days ago
- ...- 20 let svg = d3.select("body") .append("svg") .attr('id', 'chart') .attr("width",...ata = [ {"len": 31, "color": "#8dd3c7", "label": "Ja...outerRadius: 300, cornerRadius: 10, gap:...
1576 days ago
Correct bash command to zip your vcf file
bgzip -c file.vcf > file.vcf.gz tabix -p vcf file.vcf.gz #More at http://www.htslib.org/doc/tabix.html1575 days ago
Install conda on remote server !
Please take a look at the Anaconda repo archive page https://repo.continuum.io/archive/ and select an appropr...u like to install. $ wget -c https://repo.continuum.io/arc...c https://repo.continuum.io/archive/Anaconda3-5.0.1-Linux-x86....0-Linux-x86_64.sh -b -p ~/anaconda rm Anaconda3-4.2.0-Linux...1572 days ago
Exit Bash Script When Any Command Fails
This can actually be done with a single line using the set builtin command with the -e option. #1...-------------- # exit when any command fails #Putting this at...cause the script to exit if any commands return a non-zero exit...# keep track of the last executed command trap 'last_comma...1572 days ago
- ...ninstall_perl_module.pl from PerlTricks.com use 5.14.2; use ExtUtils::Installed; use ExtUtils::Packlist; # Exit unless a modu...gh and try to delete every file associated with the module foreach...$!\n"; } # delete the module packfile my $packfile = $install...
1566 days ago
Installing docker for Bioinformatics on Ubuntu !
...nloads$ sudo apt-get remove docker docker-engine docker.io container...ot a terminal) + sudo -E sh -c echo "deb [arch=amd64] https:...non-root user, you should now consider adding your user to t...r and the local filesystem create Create a new contai...1565 days ago
Perl script to reads and extract webpage contents !
use 5.010; use strict; use warnings; use WWW::Mechanize; my ($url) = @ARGV; die "Usage: $0 URL\n" if not $url; my $w = WWW::Mechanize->new; $w->get($url); say $w->content; #Run #jit@jit-HP-Pro-3335-MT:~/Downloads/testDock$ perl web.pl https://bioinformaticsonline.com1565 days ago
