Results for "BASE"
Bio-Scripts
(JitMetaENV) ➜ META_PE conda install -c bioconda seqtk Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.1264 days ago
- (JitMetaENV) ➜ assembly conda install -c bioconda bwa Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.
1264 days ago
Install asciigenome using conda !
(JitMetaENV) ➜ viruses conda install -c bioconda asciigenome Collecting package metadata (current_repodata.json): / done Solving environment: done ==> WARNING: A newer version of conda exists.1264 days ago
- (JitMetaENV) ➜ day3 conda install -c bioconda krona Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists. 2020.12.5-py36h5fab9bb_1 Proceed ([y]/n)?
1263 days ago
- (JitMetaENV) ➜ day3 conda install -c bioconda maxbin2 Collecting package metadata (current_repodata.json): done Solving environment: failed with initial frozen solv...
1263 days ago
Create random 10000 SNPs in genome !
(base) ➜ dupStudy git:(master) ✗ perl ../simuG.pl -refse...[Sun Jan 10 16:05:57 2021] Introducing random SNPs based on the following parameters:...muSNP.refseq2simseq.map.txt Generating reference-based vcf file for genomic variant...1259 days ago
Create random 1000 INDEL in genome !
(base) ➜ dupStudy git:(master) ✗ perl ../simuG.pl -refse...un Jan 10 16:14:00 2021] Introducing random INDELs based on the following parameters:...INDEL.refseq2simseq.map.txt Generating reference-based vcf file for genomic variant...1259 days ago
Create random 1000 CNVs in genome !
(base) ➜ dupStudy git:(master) ✗ perl ../simuG.pl -refseq simuINDEL.simseq.genome.fa...duced during simulation: simuCNV.refseq2simseq.map.txt Generating reference-based vcf file for genomic variant...1259 days ago
Create random 5 inversions in genome !
(base) ➜ dupStudy git:(master) ✗ perl ../simuG.pl -refse...an 10 16:30:40 2021] Introducing random Inversions based on the following parameters:...muINV.refseq2simseq.map.txt Generating reference-based vcf file for genomic variant...1259 days ago
Create random 2 translocations in genome !
(base) ➜ dupStudy git:(master) ✗ perl ../simuG.pl -refse...0 17:12:58 2021] Introducing random Translocations based on the following parameters:...TRANS.refseq2simseq.map.txt Generating reference-based vcf file for genomic variant...1259 days ago
