Parse a genbank file using regular expressions
...f ($trans) { # translation still going on if (!/"/) { # no terminal quote; translation continues $protein .= $_; } elsif (/(.*)(")/) { # terminal quote; end of translation...2968 days ago
Installing docker for Bioinformatics on Ubuntu !
...fsSL "https://download.docker.com/linux/ubuntu/gpg" | apt-key add -qq - >/dev/null Warning: apt-key output should not be parsed (stdout is not a terminal) + sudo -E sh -c echo "deb [...1564 days ago
1558 days ago
Print in terminal with python !
#!/usr/bin/env python import time import curses def pbar(window): height, width = window.getmaxyx() for i in range(10): window.addstr(height -1, 0, "[" + ("=" * i) + ">" + (" " * (10 - i )) + "]") window.refresh() time.sleep(0.5) curses.wrapper(pbar)1029 days ago
1012 days ago
Command line to print disk usage on Linux terminal !
#Print disk usage - perl du -h |perl -e'%h=map{/.\s/;99**(ord$&&7)-$`,$_}`du -h`;die@h{sort%h}' #Bash du -k * | sort -nr | cut -f2 | xargs -d '\n' du -sh #Base du -scBM | sort -n #More du -s * | sort -rn | cut -f2- | xargs -d "\n" du -sh865 days ago