Bioinformatics tools developed for Oxford Nanopore data analysis !
...rtable real-time device for DNA and RNA sequencing. Each consumable flow cell can now generate 10–20 Gb of DNA sequence data. Ultra-long read lengths are possibl...2348 days ago
Bioinformatics tools for telomere to telomere assembly !
...) calls in VCF format (Aaron Wenger)● JumboDB – tool for de Bruijn graph construction (Anton Bankevich @AntonBankevich)● uLTRA – tool for splice...1019 days ago
Latest paper on comparison of mapping tools
....com/gmap/ RMAP http://rulai.cshl.edu/rmap/ mrsFAST http://mrsfast.sourceforge.net/Home http://sourceforge.net/projects/mrsfast/files/mrsfast-ultra-3.1.0/ BFAST http://sourcef...3924 days ago
3586 days ago
Genome Assembly Tools and Software - PART2 !!
...hoRAH is a software package that allows for inference about the structure of a population from a set of short sequence reads as obtained from ultra-deep sequencing of a mixed sa...2713 days ago
Commercial and public next-gen-seq (NGS) software
...en by Nils Homer, Stanley F. Nelson and Barry Merriman at UCLA.Bowtie - Ultrafast, memory-efficient short r...Seq reads. It aligns RNA-Seq reads to mammalian-sized genomes using the ultra high-throughput short read al...3547 days ago
Software packages for next gen sequence analysis
...by Nils Homer, Stanley F. Nelson and Barry Merriman at UCLA. * Bowtie - Ultrafast, memory-efficient short r...Seq reads. It aligns RNA-Seq reads to mammalian-sized genomes using the ultra high-throughput short read al...3270 days ago
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2399 days ago
Postdoctoral Fellowship in Bioinformatics at pesolelab
Job Description: Bioinformatics postdoc positions are available in the area of genomics with main focus on exome and RNAseq technologies by ultra high-throughput sequencing platforms...3167 days ago
Bioinformatics jobs at Chittaranjan National Cancer Institute
...stem cell research and gene therapy Molecular cancer immunology and immunotherapy Molecular epidemiology Tumor endocrinology Translation research Ultra structural/tissue engg/develo...2803 days ago
Comment on "Does anyone have Nanopore latest updates?"
Sequencing ultra-long DNA molecules with the Oxford Nanopore MinION http://biorxiv.org/content/early/2015/05/20/019281.full-text.pdf+html Additional tools for analyzing Oxford Nanopore minION data by John Urban https://github.com/JohnUrban/poreminion3299 days ago