Results for "multi-draft"

Wire posts

  • Multifasta to singleline fasta. $ awk '/^>/ {printf("\n%s\n",$0);next; } { printf("%s",$0);} END {printf("\n");}' < file.fa #Multi #Single #Fasta #Convert

    2070 days ago

  • Split a multi-FASTA file into individual FASTA files: awk '/^>/{s=++d".fa"} {print > s}' multi.fa #split #multifasta

    1965 days ago

  • Make Multi-point “dumbbell” Plots in ggplot2 https://www.r-bloggers.com/make-multi-point-dumbbell-plots-in-ggplot2/ #dumbbell #ggplot2

    1822 days ago

  • Multiline to singleline covert. $ awk '/^>/ {printf("%s%s\t",(N>0?"\n":""),$0);N++;next;} {printf("%s",$0);} END {printf("\n");}' < input.fa #Multi #Single #Convert #awk

    1650 days ago

  • #Improving draft #assemblies by iterative mapping and #assembly of short reads to eliminate #gaps https://genomebiology.biomedcentral.com/articles/10.1186/gb-2010-11-4-r41

    1581 days ago

  • #Multi-line fasta to #Single-line Fasta $ awk '/^>/ {if (NR>1) print ""; printf("%s\n", $0); next; } { printf("%s", $0) } END { printf("\n"); }' multi_line.fasta > single_line.fasta

    123 days ago