3072 days ago
Structural variation: the hidden genomic treasure
...wever, compared to SNPs, accurate detection, genotyping and understanding of CNVs is...Tools CNVnatora tool for CNV discovery and genotyping from depth of read mapping.20...uralVariants.pdfBreakSeq, structural variant genotyping using split reads Link&n...2849 days ago
Software and Tools to detect structure variation with long reads !!
...lies supporting each call Higher sensitivity for SV calls using tiled local assemblies across the entire genome instead of "signature" regions Genotyping of SVs with Illumina paired-e...2754 days ago
Next Generation Sequencing (NGS) Tutorials
...ad cleaning, mapping and SNP calling using Next Generation Sequence 10.1186/1471-2164-12-285 A framework for variation discovery and genotyping using next-generation DNA seq...3634 days ago
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Bioinformatics in Africa: Part2 - Kenya
...key tropical pathogens) 4. Structural bioinformatics 5. Development of Bioinformatics Data Management Systems 6. Gene Mining 7. High Throughput Genotyping 8. Microarray data management...1330 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...on mutations, and includes a software package called FSTpoolit for analysis of the resulting sequence reads.] Genotyping by sequencing Genome-wide genetic marker discovery and genotyping using next-generation sequenc...3926 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...ll indels from diploid sample; designed to run on “nux-like platforms” Input: BAM Output: VCF KvarQ Description: in silico genotyping for selected loci in bacteria...3055 days ago
High Density Sheep SNP Genotyping Chip released!!!
...libraries with the Illumina Genome Analyzer IIx. A set of 600 SNPs were identified by BAC end sequencing and validated with Illumina GoldenGate Genotyping Assays over 403 animals from...4043 days ago
Affy has acquired Eureka Genomics for 15M $
...Corporation To Provide High Throughput And Economical Crop And Animal Genotyping http://www.thestreet.com/sto...corporation-to-provide-high-throughput-and-economical-crop-and-animal-genotyping.html3419 days ago
Assistant Professor @ King Saud University Riyadh
...on providing analytical support for next generation sequencing data analysis – Exome-sequencing, Targetted sequencing as well as high-throughput genotyping on Illumina platform. Job...3872 days ago
Domain Analyst - Bioinformatics
Company Name: Persistent Systems Limited Location: PuneExperience: 7 - 12 Years Keywords / Skills: Bioinformatics, "Sequence Analysis", "Genotyping"Function: IT,Pharmaceutical/ Biotech...3811 days ago
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958 days ago
Comment on "List of non-commercial NGS genotype-calling software"
...ash; GRIDSS: the Genomic Rearrangement IDentification Software Suite. [ paper-2017 ]smoove – structural variant calling and genotyping with existing tools, but,smoo...1289 days ago