List of gene ontology software and tools
...ms and summarize them by removing redundant GO terms. The remaining terms can be visualized in semantic similarity-based scatterplots, interactive graphs, or tag clouds. http://revig...3856 days ago
String graph based genome assembly software and tools !
...curves in the plane; each curve is called a "string". String graphs were first proposed by E. W....ii) Simpson-Durbin algorithm is that it does not rely on de Bruijn graphs, and instead employs a differ...2475 days ago
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Bioinformatics algorithms tutorials
Useful bioinformatics tutorial, such as De Bruijn Graphs for NGS AssemblyAlgorithms for PacBio ReadsSoftware and Hardware Concepts for BioinformaticsFinding us in Homolog.us (Search...3750 days ago
A guide for complete R beginners :- Getting data into R
...spaces in a columns with ‘NA’ . The last two examples will still work with our file and give the same result as with only headers=T Graphs to get an idea of what R is...3504 days ago
Genome Assembly Tools and Software - PART2 !!
...sp;is a parallel short read assembler for large genomes using de Bruijn graphs. Taking advantage of both sha...l variants assembling based on maximum-bandwidth paths in weighted read graphs and frequency estimation via...2832 days ago
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Release Notes for Genome Workbench 2.10.5
...eatures in latest release New ProSplign tool integrated with Genome Workbench (Tutorial, Video) New export function for BAM/cSRA coverage graphs (Tutorial) New export functi...3061 days ago
Pack a perl program with their dependencies on Ubuntu !
...hub.com - A JavaScript module for the visualization of genomic sequence graphs. It automatically generates a "tube map"-like visualization of sequence graphs which have been created with...1657 days ago
Comment on "Sibelia: A comparative genomics tool"
...son Tool" (poster), WABI 2012 http://bioinf.spbau.ru/sites/default/files/SyntenyFinder.pdf 2. Max A. Alekseyev and Pavel A. Pevzner. "Breakpoint graphs and ancestral genome reconst...1431 days ago
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