Results for "Genome"
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OGDRAW - Draw Organelle Genome Maps
OrganellarGenomeDRAW converts annotations in the GenBank or EMBL/ENA format into graphical maps. The input has to be a GenBank or EMBL/ENA flat file wherase the output can vary among several types of files. The application is optimized to create detailed hi...Tags: OGDRAW, Draw, Organelle, Genome, Maps
1006 days ago
Job offer for a postdoctoral researcher in genomics / bioinformatics (2 years)
Ongoing research in the group of Karine Van Doninck involves topics at the core of evolutionary biology, including the evolution of sex, genome maintenance, recombination and extreme stress resistance on different eukaryotic systems, including rotifers, amoeba and Corbicula clams. We are emplo...Tags: Bioinformatics, Evolution, Genome, Comparative, Genomics, Rotifer, Karine
989 days ago
- The Vicoso group investigates how sex chromosomes evolve over time, and what biological forces are driving their patterns of differentiation. The Vicoso group is interested in understanding several aspects of the biology of sex chromosomes, and the evolutionary processes that shape their pecul...
Tags: Beatriz, Vicoso, Sex, Chromosome, Evolution, X, Genome
886 days ago
Peregrine & SHIMMER Genome Assembly Toolkit
Peregrine is a fast genome assembler for accurate long reads (length > 10kb, accuracy > 99%). It can assemble a human genome from 30x reads within 20 cpu hours from reads to polished consensus. It uses Sparse HIereachical MimiMizER (SHIMMER) for fast read-to-read overlaping without quadrati...Tags: Peregrine, SHIMMER, Genome, Assembly, Toolkit
934 days ago
UniqueKmer: Generate unique KMERs for every contig in a FASTA file
Generate unique k-mers for every contig in a FASTA file. Unique k-mer is consisted of k-mer keys (i.e. ATCGATCCTTAAGG) that are only presented in one contig, but not presented in any other contigs (for both forward and reverse strands). This tool accepts the input of a FASTA file consisting of ...Tags: Unique, Kmer, Mers, Contigs, FASTA, Genome
933 days ago
Useful Bioinformatics Analysis Tools !
CoMeta Classificier of reads from metagenomic sequencing experiments. • Kawulok, J., Deorowicz, S., CoMeta: Classification of Metagenomes Using k-mers, PLOS ONE, 2015; 10(4):1–23, CoMSA Compressor of multiple sequence alignments of proteins. • &...Tags: Tools, Bioinformatics, Genome, Programming
926 days ago
UCSC SARS-CoV-2 Genome Browser
The UCSC SARS-CoV-2 Genome Browser (https://genome.ucsc.edu/covid19.html) is an adaptation of our popular genome-browser visualization tool for this virus, containing many annotation tracks and new features, including conservation with similar viruses, immune epitopes, RT–PCR and sequencing...Tags: UCSC, SARS-CoV-2, Genome, Browser, COVID19
913 days ago
- HIV resources https://www.hiv.lanl.gov/components/sequence/HIV/search/search.html
Tags: HIV, Database, Genome
898 days ago
Comparative Genomics Workshops !
This meeting's objective was to obtain a big picture look at the current state of the field of comparative genomics with a focus on commonalities across genomic investigations into humans, model organisms (both traditional and non-traditional), agricultural species, wildlife species and...Tags: Comparative, Genomics, Workshops, Genome, Evolutions
893 days ago
