3663 days ago
Comment on "Next Generation Sequencing (NGS) Tutorials"
Next Generation Sequencing for DUMMIES http://users.ugent.be/~avierstr/nextgen/Next_generation_sequencing_web.pdf3663 days ago
Comment on "Does anyone have Nanopore latest updates?"
Virus reveals Nanopore mechanism: http://www.nanowerk.com/nanotechnology-news/newsid=36061.php http://www.nature.com/ncomms/2014/140616/ncomms5171/full/ncomms5171.html3666 days ago
Comment on "Does anyone have Nanopore latest updates?"
More data and relevant paper: http://figshare.com/articles/The_second_Oxford_Nanopore_read_ever_published/1060188 http://omicfrontiers.com/category/nanopore http://arxiv.org/abs/1406.42143668 days ago
Comment on "Commercial and public next-gen-seq (NGS) software"
...p://maq.sourceforge.net/maq-man.shtmlSOAP alignment tool: http://soap.genomics.or...://www.novocraft.comBWA - Burrows-Wheeler Alignment Tool: http://maq.sourceforge....ucts/zoom/index.phpSHRiMP: http://compbio.cs.toronto.edu/shrimp/SHORE (1001genome...3682 days ago
Comment on "Next generation sequencing in R or bioconductor environment"
...is the original package tutorial. http://compbio.med.harvard.edu/Supplements/ChIP-seq/tutorial.htmlHere i...se public next-generation sequencing data from within Rhttp://www.biomedcentral.com/1471-2105/14/193682 days ago
Comment on "R and Bioconductor Tutorial"
Generate map with R http://students.washington.edu/bowmanjs/wordpress/?p=10033683 days ago
Comment on "Commercial and public next-gen-seq (NGS) software"
As NGS technology continues to improve and there are seveal new approaches to handle these huge data are discussed here http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3186658/3683 days ago
Comment on "Most Commonly used Awk by Bioinformatician"
To deal with simple CSV: awk -F, '{print $1,$2}'3686 days ago
Comment on "Bioinformatics Algorithm Demonstrations and Tutorials"
A new trainable, high-speed and biologically relevant alignment algorithms of high-throughput sequencing reads to coding DNA http://nar.oxfordjournals.org/content/early/2014/05/26/nar.gku473.full3688 days ago