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World promising health companies !
...in Medicare, they were expected to live another 10 to 20 years. Biohub is...development biotech company founded on September 18, 2013 by Bill Maris and back...on individuals in the United States as of late 2018 and 5 million in Brazil. The...1597 days ago
A quick guide to Phred scaling
A quick guide to Phred scaling• Phred value = −10 * log10(ε)• Examples:• 90% confidence (10% error rate) = Q10• 99% confidence (1% err...1545 days ago
Frequent parameters for bioinformatics tools !
...p; “ILLUMINACLIP:...:2:30:10” “LEADING:15” “TRAILING:15&r...tie2' (bwa for PacBio) --subset 1000 (for PacBio) SPAd...ns.algorithm_options: --minMatch 12 --bestn 10 --minPctSimilari...noali blastn (taxonomy, 16S) -evalue 1E-10 bl...1296 days ago
Bioinformatics in Africa:- Part 1
The Institut Pasteur de Côte d’Ivoire was created by the N°72511 law of July 27th, 1972 under the Presidency of his Excellency Felix Houphouët Boigny and P...1201 days ago
- ...on directory. You have two choices: 1. Change the permissions on th... X.X.X.X, it might be elgg-1.8.0.1.zip, for example.) unz...X alpha(For example, ln -s elgg-1.8.0.1 alpha) Give user ...host) ‡You might need to use 127.0.0.1:9999 for the host...
903 days ago
Special Nucleotide Characters / Symbols !
Nucleotide symbols Nucleotide symbol Full Name A Adenine C Cytosine G Guanine T Thymine U Uracil R Guanine / Adenine (pur...881 days ago
Short-read assembly using Spades !
...t data We will use the same Illumina data as we used above: illumina_R1.fastq.gz: the Illumina forwar...stq.gz: the Illumina reverse reads Assemble Run Spades: spades.py -1 illumina_R1.fastq.gz -2 illum...836 days ago
- ...rough the process of installing Elgg on a Ubuntu 18.04 VPS. Prerequisites A fresh Vultr Cloud Compute instance with Ubuntu 18.04 and root access. Step...d, enter the MySQL root password you set in step 1. Once you are logged in to th...
617 days ago
- ...are designed to simulate reads mimicking the two main TGS technologies; (1) Pacific Biosciences (Pa...T Simulators NanoSim Nanopore SimulatION DeepSimulator DeepSimulator1.5...
594 days ago
Bioinformatics tools for genome assembly !
...ols available, each with its strengths and weaknesses. Here is a list of some widely used genome assembly tools as of my last update in September 2021: SPAdes: An assembler sp...297 days ago
