Results for "AI"
Bio-Scripts
Steps to install Conda on Linux !
.../no flags and finish till the end #Check the installation $ conda -V A few other frequently used commands # list all the conda environment available conda info --envs #...1196 days ago
Install ATOM editor on Elemantory OS / Ubuntu
...m, search, show, star, starred, stars, test, uninstall, unlink, unpublish, unstar, update, upgrade, view. Run `apm help ` to see the more details about a specific command....1190 days ago
Parse the NCBI taxonomy database with Perl !
...'homo_sapiens', 'metazoa'); #exit; #my $nam = $dbh->get_taxon(-name => $sps); $nam = $dbh->get_taxon(-taxonid => 9606); if(!$nam) { print "Try again with correct scientific name...1186 days ago
Install htop in elementary/Ubuntu OS !
...to get 80.0 kB of archives. After this operation, 221 kB of additional disk space will be used. Get:1 http://in.archive.ubuntu.com/ubuntu bionic/main amd64 htop amd64 2.1.0-3 [80...1166 days ago
- ...rent_repodata.json): done Solving environment: failed with initial frozen solve....ying with flexible solve. Solving environment: failed with repodata from current...WARNING: A newer version of conda exists. pkgs/main::ca-certificates-2021.1.19-h...
1162 days ago
Python script to download covid genome !
#!/usr/bin/env python3 # these are the publicly available "complete" sequences # https://www.gisaid.org/ has more (1200?), but they require you to sign up import requests import yaml seqs = yam...1150 days ago
R script to visualize fastANI core-genome comparison
####### # Purpose: Visualize fastANI core-genome comparison # Usage: Rscript # Output: .pdf # Uses genoPlotR package: http://genoplotr.r-forge.r-project.org...1115 days ago
- vik@vik-Lenovo-ideapad-320-15ISK:~/Downloads/setu/setu$ conda install -c bioconda shasta Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.
1068 days ago
- vik@vik-Lenovo-ideapad-320-15ISK:~/Downloads/setu/setu$ conda install -c bioconda/label/cf201901 gap2seq Collecting package metadata (current_repodata.json): done S...
1068 days ago
- ...ing package metadata (current_repodata.json): done Solving environment: failed with initial frozen solve. Retrying with flexible solve. Solving environment: failed with repodata from current...
1068 days ago
