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• • Rahul Nayak@rahul

  

  Understanding PairedEnd(PE) mapping https://davetang.org/muse/2014/07/24/getting-started-paired-end-reads/ #PE #Paired #End #PairedEnd #Mapping #Map #Learn

  2113 days ago

• • Jit@jit.aber

  

  perl -pe '/^>/ ? print "\n" : chomp' LR.fasta | tail -n +2 > out.fasta #singleLine #Multifasta #Multi2Single

  2110 days ago

• • Rahul Nayak@rahul

  

  Multi-line fasta to single line fasta $ perl -pe '/^>/ ? print "\n" : chomp' in.fasta | tail -n +2 > out.fasta #Multiline #Singleline #Fasta

  2083 days ago

• • Jit@jit.aber

  

  Genome Assembly Cookbook http://aidenlab.org/assembly/manual_180322.pdf #HiC #3D-DNA #Juicer

  2074 days ago

• • BioStar@biostar

  

  Understanding Paired End and Mate pair reads http://www.biorigami.com/wp-content/uploads/2012/02/PAIREDEND-MATEPAIR.pdf #Reads #Mate #Pairs #PE #Reads #MatePair

  2067 days ago

• • Rahul Nayak@rahul

  

  Nice genome assembly tutorial http://aidenlab.org/assembly/manual_180322.pdf #Assembly #Tutorial #Genome #NGS

  2066 days ago

• • Neelam Jha@neelam

  

  Reverse complement of fasta sequence $ tr -d "\n " < chrII.fa | tr "[ATGCatgcNn]" "[TACGtacgNn]" | rev > chrII_reverseHai.fa #Reverse #Complement #DNA

  2057 days ago

• • Shruti Paniwala@shruti

  

  Variant calling https://www.ebi.ac.uk/training/online/course/human-genetic-variation-i-introduction/variant-identification-and-analysis/what-variant #variant #snp #tutorial

  2033 days ago

• • Abhimanyu Singh@abhimanyu

  

  Louvain algorithm https://neo4j.com/docs/graph-algorithms/current/algorithms/louvain/ #Louvain #algorithm

  2021 days ago

• • Neelam Jha@neelam

  

  Understanding Alignments https://bioinformatics-core-shared-training.github.io/cruk-summer-school-2017/Day1/Session5-alignedReads.html #Understanding #Alignments

  2018 days ago

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