Results for "Amplicon"
Blogs
BBTools for bioinformatician !
...--fuse.shFuse will automatically reverse-complement read 2. Pad (N) amount can be adjusted as necessary. This will for example create a full size amplicon that can be used for alignmen...2270 days ago
Bioinformatics tools for telomere to telomere assembly !
...processing Iso-Seq data and other long-read transcriptome data (Richard Kuo @GenomeRIK)● pbaa (PacBio Amplicon Analysis) – separates complex mixtures of amplicon targets from genomic samples...992 days ago
- +1 more Blogs
Bookmarks
- ...Seq Protocol ChIP-Seq In this protocol we discuss ChIP-Seq: a method to analyze the interaction between proteins and DNA. Amplicons Protocol Amplicon Alignment In this protocol...
3653 days ago
- ...required: Reads from small-RNA sequencing contain the 3’ sequencing adapter because the read is longer than the molecule that is sequenced. Amplicon reads start with a primer seq...
2914 days ago
- +2 more Bookmarks
Opportunity posts
Project Assistant BioInformatics
...s, Linux (command line and GUI) and Unix; Perl / Python / R /C-programming. Practical knowledge of analysis of Next generation sequence datasets (amplicon sequencing, whole metagenome,...3107 days ago
Project Assistant II Jobs opportunity in National Chemical Laboratory (NCL) on temporary basis
...s, Linux (command line and GUI) and Unix; Perl / Python / R /C-programming. Practical knowledge of analysis of Next generation sequence datasets (amplicon sequencing, whole metagenome,...3103 days ago
Tags
Grinder / Biogrinder - A versatile omics shotgun and amplicon sequencing read simulator
Grinder is a versatile program to create random shotgun and amplicon sequence libraries based on DNA, RNA or proteic reference sequences provided in a FASTA file. Grinder can produce genomic, metagenomic, transcriptomic, metatranscriptomic, proteomic, metaproteomic shotgun and amplicon datasets...Tags: Grinder, Biogrinder, Versatile, Omics, Shotgun, Amplicon, Sequencing, Read, simulator
2538 days ago
DADA2: Fast and accurate sample inference from amplicon data with single-nucleotide resolution
The DADA2 tutorial goes through a typical workflow for paired end Illumina Miseq data: raw amplicon sequencing data is processed into the table of exact amplicon sequence variants (ASVs) present in each sample. The DADA2 Workflow on Big Data goes through workflow op...Tags: DADA2, Fast, accurate, sample, inference, amplicon, data, single-nucleotide, resolution
1271 days ago
