Versatile genome assembly evaluation with QUAST-LG
...he refactoring of alignment analyzing modules New k-mer-based completeness and correctness metrics BUSCO added for enhanced reference-free analysis The concept of upper bound&n...1980 days ago
1971 days ago
ZENBU: a collaborative, omics data integration and interactive visualization system
ZENBU is a data integration, data analysis, and visualization system enhanced for RNAseq, ChipSeq, CAGE and other types of next-generation-sequence-tag (NGS) based data. ZENBU all...1967 days ago
Genome assembly tutorial "Genome Assembly for short and long reads"
...ssembly of a bacterial genome. You will be guided through the genome assembly starting with data quality control, through to building contigs and analysis of the results. At the end of...1951 days ago
Roary: the Pan Genome Pipeline
...ut compromising the quality of the results. 128 samples can be analysed in under 1 hour using 1 GB of RAM and a single processor. To perform this analysis using existing methods would...1949 days ago
LRSDAY: Long-read Sequencing Data Analysis for Yeasts
Long-read sequencing technologies have become increasingly popular in genome projects due to their strengths in resolving complex genomic regions. As a leading model org...1732 days ago
1640 days ago
BioJupies: Automatically Generates RNA-seq Data Analysis Notebooks
With BioJupies you can produce in seconds a customized, reusable, and interactive report from your own raw or processed RNA-seq data through a simple user interface Bio...1251 days ago
Machine learning training and courses in bioinformatics !
...e learning techniques. We will focus on probabilistic models (Markov models, Hidden Markov models, and Bayesian networks) for biological sequence analysis and systems biology. Other ma...1605 days ago
modelStudio: a package automates the explanation of machine learning predictive models
...produce plots and descriptions for various local and global explanations. Tools for model exploration unite with tools for EDA (Exploratory Data Analysis) to give a broad overview of...1583 days ago