Results for "Analysis of up/dawn-regulation of brain products and its carcinogenic effects on peripheral cells"
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Hagfish - assess an assembly through creative use of coverage plots
Hagfish is a tool that is to be used in data analysis of Next Generation Sequenc...eriments. Hagfish builds on the concept of coverage plots and aims t...encing experiment. Hagfish requires a reference sequence and a...2918 days ago
- gkno opens the world of complex bioinformatic analysis to people of all level of computational expertise. This site contains documentation, tutorials and information on all the tools that comprise gkno. http://gkno.me/how-to/install.html http://gkno.me/software.html
2918 days ago
PolyPhen-2: Prediction of functional effects of human nsSNPs
PolyPhen-2 (Polymorphism Phenotyping v2) is a tool which predicts possible impact of an amino acid substitution on the structure and function of a human protein using straightforward physical and comparative considerations.2915 days ago
- Cytoscape is an open source software platform for visualizing complex networks and integrating these with any type of attribute data. A lot of Apps are available for various kinds of problem domains, including bioinformatics, social network analysis, and semantic web.
2915 days ago
- methylKit is an R package for DNA methylation analysis and annotation from high-throughput b...age is designed to deal with sequencing data from RRBS and its varian...r 5hmC obtained from Tab-seq or oxBS-seq. It can also handle...
2904 days ago
- Tools for making blobplots or Taxon-Annotated-GC-Coverage pl...ing raw genome data for contaminants, symbionts and par...2013-10-01 to Frontiers in Bioinformatics and Comput...It contains bash/perl/R scripts for running the analy...
2894 days ago
- The Genome Assembly Evaluation Metrics and Reporting (GAEMR) package is an assembly analys...e program to generate a complete analysis rep...ally to generate specific charts and tab...to be entered into GAEMR’s analysis p...nce enabling the generation of standar...
2893 days ago
- In a nutshell Anvi’o is an analysis and visualization platform for ‘o...of many people who directly or indirectly contributed to its dev...is the acknowledgements section of our methods paper An analysis and v...
2891 days ago
- statistical analysis and visulization of functional profiles for genes and gene clu...is package implements methods to analyze and vis...> with contributions from Li-Gen Wang and Giovan...allationTo install this package, start R and e...
2891 days ago
Linux command line exercises for NGS data processing
The purpose of this tutorial is to introduce students to the frequently used tools for NGS analysis as well as giving experience i...y (cd) to the linuxTutorial folder, and do all t...he exercises as it is a language in itself and is use...at is a program that takes your commands...2885 days ago
