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Results for "BED%20files"

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• • Jitendra Narayan@admin

  

  #Bioinformatics #Scientist E at #ACTREC http://www.actrec.gov.in/data%20files/Vacancies/2015/Faculty-Positions-SOE-24-11-15.pdf

  3073 days ago

• • Surabhi Chaudhary@surabhi

  

  Studentship at ACTREC http://www.actrec.gov.in/data%20files/Vacancies/2017/Walk-in-scin-stud-JRF-AV.docx

  2650 days ago

• • Jit@jit.aber

  

  Get the fasta sequence of the coordinates http://bedtools.readthedocs.io/en/latest/content/tools/getfasta.html #Fasta #Bed #Coordinates #Bedtools

  2607 days ago

• • Jit@jit.aber

  

  get the fasta genes using gff3 and genome.fa sequence: ~/Tools/bedtools2/bin/bedtools getfasta -fi vaga.fa -bed Adineta_vaga.v2.gff3 -fo Adineta_vaga_genes.fa

  2293 days ago

• • Rahul Nayak@rahul

  

  Get the sequences using coordinates in bed file. $ bedtools getfasta -fi input_file.fa -bed regions_file.bed #Bed #Extract #Sequence #bedtools

  2236 days ago

• • Shruti Paniwala@shruti

  

  Bioinformatic jobs at TATA MEMORIAL CENTRE ADVANCED CENTRE FOR TREATMENT, RESEARCH AND EDUCATION IN CANCER (ACTREC) http://www.actrec.gov.in/data%20files/Vacancies/2018/ACTREC-Advt-A-1-(COR)-2018.pdf

  2177 days ago

• • Neelam Jha@neelam

  

  BAM2BED conversion bamToBed -i overall_exp_genome_rep1.bam > alignment.bed #Bed #bam #bamToBed #convert

  2018 days ago

• • Neelam Jha@neelam

  

  Bioinformatics jobs at http://actrec.gov.in/data%20files/Vacancies/2018/ACTREC-Advt-74-2018.pdf #ACTREC #Job #Bioinformatics

  2010 days ago

• • Abhimanyu Singh@abhimanyu

  

  #Intersect your bed data with coverage $ bedtools genomecov -ibam aln.bam -bga | awk '$4==0' | bedtools intersect -a cds.bed -b - -f 1.0

  1990 days ago

• • Rahul Nayak@rahul

  

  make a window of 60k of bed file. $ bedtools makewindows -g genome -w 60000 > 60K.windows.bed #bed #bin #window

  1934 days ago

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