Software for genome assembly !
...tps://github.com/PacificBiosciences/ GenomicConsensus 8 PILON error correction https://github.com/broadinstitute/pilon/wiki 9 BUSCO single copy gene markers http://busco.ezlab.org/ 10 Bandage graph...1346 days ago
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Genome Assembly Tools and Software - PART1 !!
...heterogeneity and a novel length-dependent model of gap formation. BUSCO v1.1b1 – Assessing Genome Assembly and Annotation Completeness with Single-copy Orthologs BUSCO completeness assessment emplo...2688 days ago
Installing Busco version 4.0.6
...install -c bioconda -c conda-forge busco=4.0.6 Collecting package met...added / updated specs: - busco=4.0.6 The following pack...1 131.2 MB bioconda busco-4.0.6 |...oconda/linux-64::blast-2.2.31-1 busco bioconda/noarch:...1455 days ago
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Tags: Bioinformatics, Computational Biology, Education, Cancer, Research, BUSCO, Genome, Annotation, Pipeline, NGS, Assembly, Orthologs
3012 days ago
Tags: Bioinformatics, Validation, Assembly, BUSCO, Orthologs, NGS
2919 days ago
Comment on "Short-read assembly using Spades !"
...of assembly: After running SPAdes, the next step is to evaluate the quality of the assembled genome. This can be done using tools such as QUAST or BUSCO. These tools assess the compl...417 days ago
2933 days ago