Results for "Bash Scripting"
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How to install Perl modules manually, using CPAN command, and other quick ways
As a bioinformatics programmer, and crunchy data analyser you need to install several perl modules and dependenci...king. Following are the error message when CPAN module is not installed.# cpan-bash: cpa...3946 days ago
- In comparative genome analysis work, we usually compare more than two genomes and looks for syntenic regions am...uch file or directoryThis was fixed with the following apt-get command (in the bash shel...
3936 days ago
List of bioinformatics workflow management tools !
Here are list of Workflow Managers BigDataScript – A cross-system scripting language for working with big...1139 days ago
- ...xt-processing tasks and other scripting needs. It has a C-like syntax...u can use it as a stand-alone scripting language. Why use AWK instea...# it feel sort of like shell scripting, but to get the same output,...mmon # in UNIX that AWK is a scripting language that does all of it...
1832 days ago
Common Bioinformatics Interview Questions !
The possibility of an interview for a bioinformatics position in the life sciences...tics come from? How the heck did you end up in this field? Why programming and scripting ? 2. What is your plan for y...1194 days ago
Run bash script in Perl program !
BioPerl is a compilation of Perl modules that can be used to build bioinformatics-related Perl scripts. It is used, for example, in the development of source codes, stan...633 days ago
- SLURM commands The following table shows SLURM commands on the SOE cluster. CommandDescription sbatc...o collect standard output and error at run time, for example #!/bin/bash #...
665 days ago
