Results for "Big data"
Blogs
How to install Perl modules manually, using CPAN command, and other quick ways
As a bioinformatics programmer, and crunchy data analyser you need to install several perl mo..."yum" for the rescue. Dont worry biological data cruncher, this is true we are...nning (atstart or never)? [atstart]Cache metadata (yes/no)? [yes]Policy on buil...3948 days ago
Five unique traits of effective computational biologist
Bioinformatics research is driven by large set of software, scripts, and tools to analyse gigantic biological data. Being a great biological pro...3948 days ago
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Bookmarks
List of popular bioinformatics software/tools
In current genome era, our day to day work is to handle the huge geneome sequences, expression data, several other datasets. This link provide a comprehensive list of commonly used sofware/tools.3943 days ago
- Bioinformatics is developing very rapidly. With new tool...now a days, easy to analyse the large scale genomics datasets. But we need to understan...he background of software/tool to better explain the data computationally. I fou...
3943 days ago
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Files
Regular Expression Cheat Sheet
The Regular Expression are the sole of Perl language, and for bioinformatician it is just a magical stick to resolve gingatic string data. We did not find any good and...3951 days ago
Master Thesis: Trans-membrane topology prediction through Markov based decoders
Abstract: Background/Motivation: The dearth of struct...tire topology for 77% of the sequences in a standard dataset of 86 proteins with superv...Matlab Conclusion/Implementation: Here discriminant data mining approach was used to p...3943 days ago
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Discussion topics
Which are the best statistical programming languages to study for a bioinformatician?
In Bio-informatics based genome sequencing and predicting metabolic pathways&n...est to Bio-informatics work that is math heavy and deals with a large amount of data.3950 days ago
- The key to finding a solution is to notice that most&nbs...is increasing rapidly, but the actual amount of new data is very small. In other words...ipedia.org/wiki/Compression_of_Genomic_Re-Sequencing_Data http://www.nature.com/nbt/jo...
3918 days ago
Pages
Bio++ : C Language libraries for your biological need
C has always been a language that never at...Access), allowing you to fetch public databases like GenBank, EMBL or Sw...ogenetics and molecular evolution Data structure and IO Phylogeneti...rks with Function objects).Statistics: DataTable object, with I/O from CS...3946 days ago
- I found several useful bioinformatics arti...uates. Elementary Sequence Analysis - Database Searching by B. Gold...ision. Protein Sequence Alignment and Database Scanning Geoff Barto...sp;Bio-IT World , Dec. 10, 2002. Data stored in multiplying bacteri...
3919 days ago
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Top-level pages
- ...f large amounts of biological data, using networks of computers and databases." - from the glossary fo...g biological laws solely from data analysis by induction (e.g. A...ctures are stored in specific databases (for example, the Protei...sis of structural and genomic data will certainly get more impor...
3945 days ago
- ...ictive information from large databases. Data mining is becoming an increas...n answer. This is exploratory data analysis, one of the most dif...ustrating positions to be in. Data mining is a huge field and ca...covering hidden value in your data warehouse:http://www.thearlin...
3944 days ago
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Wire posts
News
- InterpretOmics, a big data analytics startup that focuses on life sciences, has received angel funding of around Rs 10 crore from a group of investors including Singapore's information technology and shipping company, Amarante. http://www.interpretomics.co/
3918 days ago
R package for visualising GO enrichment
An R package that visualizes the GO enrichment results as word clouds and arranges them together with figures of experimental data. This allows us to draw infor...3938 days ago
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Opportunity posts
Structural polymorphism analysis from NGS data
The LabEx BASC (Biodiversity, Agroecosyste...alyze Next Generation Sequencing (NGS) data analysis. In the context of a...order to ensure compliance of produced datasets with pipelines requiremen...tional facilities and expertise in NGS data analysis, and will benefit as...3947 days ago
- van Noort Group is looking for PhD fellows...hnologies produce large amounts of raw data that can be transformed into...from the growing amount of biological data becoming available and turn b...re based on a combination of published data. An important part of the gen...
3947 days ago
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ResearchLabs posts
- The human genome project and similar projects in disease-causing organisms such as...ding in human disease. Research Area: Analysis of Next Generation sequence data in cancer Methods for analys...
3946 days ago
- Statistical functional genomics in experimental medicine The genome projects and t...cal and biological backgrounds. Research Area: Linear models for microarray data Digital gene expression tech...
3946 days ago
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Fun
Bioinformatician become producer/director !!!
If a Bioinformatician starts producing Hindi Bollywood m...r Gene se Genome tak. Maine BLAST kiya. NCBI wale Data le jayenge Raju ban ga...T To Hona Hi Tha !! Meri Gene Tumhare Paas Hai Aao Database Search Kare Bioinformati...3917 days ago
The Best Bioinformatics / Computational Biology Quotes
Bioinformatician are not anti-social; We are just genome friendly. Bioinformatic...omes. I'm BioGeek. Fedup with LIPS, try God script. Idiot, Go ahead, make my data! Thank god, my genome just c...3718 days ago
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Video
Computational Biology in the 21st Century: Making Sense out of Massive Data
Computational Biology in the 21st Century: Making Sense out of Massive Data Air date: Wednesday...ial increase in genomic and biomedical data, which will soon outstrip adv...racting new science from these massive datasets will require not only fas...3900 days ago
Bioinformatics -- Understanding of living systems through information science
Recently, the progress of the Human Genome Project, aiming to decode all human DNA...r to certain lifestyle-related diseases, by understanding their personal genome data. So, I think it's amply possi...3915 days ago
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Bio-Scripts
- (JitMetaENV) ➜ JitMeta conda install grabseqs -c louiejtaylor -c bioconda -c conda-forge Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.
1215 days ago
Python script to download covid genome !
#!/usr/bin/env python3 # these are the publicly available "complete" sequences...ead().split("\n")[1:] allseq[nm] = ''.join(dna) import json with open("data/allseq.json", "w") as f: j...1134 days ago
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Polls
Which of the followings are the best place to study Bioinformatics ?
Bioinformatics is a major growth area and qualified Bioi...cians are in high demand. An explosion in biological data has resulted from genome proj...atics provides the tools to analyse and exploit such data sets.Can you please suggest m...3415 days ago
At what age did you gain passion in Bioinformatics?
Most of the bioinformatician were biologist ( yeah ... not all ;), and at later stage they gain a passion in Bioinformatics and learn it. When did you get inclined towards computational analysis of biological data?3237 days ago
Tryst
Tryst with a Bioinformatician # Dr Altan Kara
Dr Altan Kara is a Bioinformatics...ating the globally produced biological data to derivate unified solutions...arison of high-throughput experimental data in an integrated manner and b...im? With the increasing amount of data in databases, there is alread...2360 days ago
Groups
BioJava is an open-source project dedicated to providing a Java framework for processing biological data. It provides analytical and s...3901 days ago
R is a free software programming language and a...uage is widely used among statisticians and data miners for developing statistical software and data analysis. R's popularity has...nd comprehension of high-throughput genomic data. Bioconductor uses the R stat...3949 days ago
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Tags
Computational Biology in the 21st Century: Making Sense out of Massive Data
Computational Biology in the 21st Century: Making Sense out of Massive Data Air date: Wednesday, February 01, 2012, 3:00:00 PM Category: Wednesday Afternoon Lectures Description: The last two decades have seen an exponential increase in genomic and biomedical data, which will soon...Tags: Bioinformatics, Computational Biology, Big Data
3900 days ago
- Arvados is a free and open source bioinformatics platform for genomic and biomedical data. User can Store | Organize | Compute | Share the data for free.
Tags: Bioinformatics, Computational Biology, Big data, Analysis, Share, Run, Compute, Free, Arvados, Organise, Store
3513 days ago
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Comments
Comment on "Sibelia: A comparative genomics tool"
...a very short period of time, they can be quite big -- ~20*N bytes, where N is t...create any temporary files and store all it's data in RAM. Output descriptio...number of genomes. To overcome this, plot only big blocks, see section "Minimum b...1283 days ago
- Curoverse is a new platform for the dawning era of biomedical big data https://curoverse.com/ Jobs: https://curoverse.com/about/jobs/
3601 days ago
- +1 more Comments
