1737 days ago
Perl script to run in parellel !
#!/usr/bin/perl use strict; use warnings; use Parallel::ForkManager; use Bio::SeqIO; my ($sequence_data_ref) = parse_genome_files($ARGV[0]); my %genome=%{$seque...1700 days ago
Perl script to remove duplicated lines !
#!/usr/bin/perl use strict; use warnings; { $_ = ; my $next_line; while( $next_line = ) { #print "current line: $_ -- next line: $next_line$/";...1574 days ago
Install Samtools, Bcftools and htslib on Ubuntu !
...et install libncursesw5-dev sudo apt-get install liblzma-dev cd /usr/bin wget https://github.com/samt...f bcftools-1.9.tar.bz2 cd bcftools-1.9 make export PATH="$PATH:/usr/bin/bcftools-1.9" export PATH="$...1572 days ago
Bash commandline to install Anaconda !
...re release. no change /data/sata_data/workshop/wsu29/anaconda3/condabin/conda no change /data/sata_data/workshop/wsu29/anaconda3/bin/conda no change /data/sa...1569 days ago
Bash command to install Miniconda !
...o] >>> yes no change /data/sata_data/workshop/wsu29/miniconda3/condabin/conda no change /data/sata_data/workshop/wsu29/miniconda3/bin/conda no change /data/sa...1569 days ago
1565 days ago
Perl script to delete the adjacent repeats !
/usr/bin/perl #Mostly the interview question for bioinfomatician ! #Write a code to delete the adjacent repeated character .... $string='ATTTTTTGGC'; # This shou...1564 days ago
Install python pip and numpy on Linux / Ubuntu
...ols python-wheel python-xdg python2.7-dev Suggested packages: python-crypto-doc python-dbus-dbg python-dbus-doc python-gi-cairo libkf5wallet-bin gir1.2-gnomekeyring-1.0 pytho...1564 days ago
Installing ggplot2 and its dependencies on Ubuntu !
...t-HP-Pro-3335-MT:~/Downloads/MitoHunter/minidot/bin$ sudo R [sudo] password for...OME... /usr/lib/R checking for R... /usr/lib/R/bin/R checking for endianness......for CXX1X flag use... no checking for cat... /bin/cat checking for local ICUDT...1564 days ago