Commercial and public next-gen-seq (NGS) software
...software that extends the CLCbio Main Workbench software. Incl...echfak.uni-bielefeld.de/swift/biolib.is library and a set of sc...an at CSHL. (published in BMC Bioinformatics). POSIX OS require...d Ewan Birney at the European Bioinformatics Institute (EMBL-EB...3517 days ago
Software packages for next gen sequence analysis
...software that extends the CLCbio Main Workbench software. Incl...an at CSHL. (published in BMC Bioinformatics). POSIX OS require...uence. Developed with Applied Biosystem's colourspace genomic r...Sequence Reads. Authors are Fabio De Bona, Stephan Ossowski, Ko...3240 days ago
Binding Site Prediction in Protein !
The interaction between proteins and other molecules is fundamental to all biological functions. In this section we include tools that can assist in prediction of interaction sites...2200 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...s (Illumina, Ion Torrent, Pac Bio and Roche 454) and project ty...available for every user Biodatomics Open source platfo...s machine learning model with biology and statistics to predict...tution or indel has impact on biological function of the protei...2907 days ago
Tools for Searching Repeats And Palindromic Sequences
...nverted (reversed 180°), still reads CGAAGC. The European Molecular Biology Open Software Suite (EMBO...on-line services providing the EMBOSS tools, for example: Wageningen Bioinformatics Webportal EMBOSS e...2209 days ago
Genome Assembly Tools and Software - PART1 !!
...Sequence Assembler is revolutionary bioinformatics software for autom...currently Illumina, 454 and Pacific Biosciences). NanoMark &ndas...ks are described in the Genome Biology manuscript. mi...ity. More Tools at http://bioinformaticsonline.com/pages/vi...2684 days ago
Awesome perl frameworks, libraries and software - PART 1
...d command-line Twitter client written in Perl bioperl/bioperl-live - Core BioPerl...A pipelining tool to automate and standardise bioinformatics analyses on cluste...eHammer 4: an error mail analyzer. shenwei356/bio_scripts - Practical, reu...2487 days ago
List of visualization tools for network biology
...in BMC are listed here https://bmcbioinformatics.biomedcentral.com/articles/sectio...latory and other data http://www.biologicalnetworks.org BioMiner...Interactive graphical browser for biological networks http://www.g...n-protein interactions from BIND, BioGRID, DIP, HPRD, IntAct and MI...2286 days ago
Installing Bio::SCF perl module
...lation steps check this http://bioinformaticsonline.com/blog/vie...nd-and-other-quick-ways installing Bio::SCF perl module is daunting...loads/io_lib-1.9.0' 3. Now install Bio::SCF Now follows these steps..._ a) ^SCF.xs: In function ‘XS_Bio__SCF_get_scf_fpointer’:...2216 days ago
Tools for Protein-Protein Docking !
Predicting the structure of protein–protein complexes using docking approaches is a difficult problem whose major challenges include identifying correct solutio...2200 days ago