Results for "Bioinformatics and Computational Biology"
Top-level pages
List of Bioinformatics Software Tools for Next Generation Sequencing
...g allele specific copy number and Loss of Heterozygosity (LOH),...Description: identifies SNPs and INDELs from pooled high-throu...CLImAT Description: standalone program; “accurate...s machine learning model with biology and s...s information from PolyPhen-2 and SIFT Input: tab-delimited with c...2922 days ago
Worldwide funding agencies to fund your bioinformatics research !!
...gargantuan geology or bigtime biology project. And other disciplines, of course. Alexander von Humboldt Foundation:&nb...ead this scientific knowledge and train the...al models, gene therapy, neurobiology and development of the basal...igh priority on both clinical and basic scientific research into th...2951 days ago
Tools for Searching Repeats And Palindromic Sequences
What are genomic interspersed repeats? In the mid 1960's scientists disco...r whether the nucleic acid strand is read starting from the 3'...ences on the complimentary strands read the same in either dire...s, for example: Wageningen Bioinformatics Webportal EMBOSS explo...2224 days ago
Genome Assembly Tools and Software - PART1 !!
...file of short sequence reads and a file of quality-value as the input. Si...our assembly. For the sake of computational memory saving and convenience of data inquiry, high-throug...ler 20160120 – Scalable and Accurate Targeted Gene Assembly Tool...2699 days ago
Awesome perl frameworks, libraries and software - PART 1
A curated list of awesome Perl frameworks, libraries and software. major/MySQLTuner-perl ...l to automate and standardise bioinformatics analyses on cluste...toreBill - A perl script and tex files to create bills for...actical, reusable scripts for bioinformatics mozilla-bteam/bmo...2502 days ago
Phylogenetic & Molecular Genetics Terms and Definitions
...here "hair" is the character, and "present" and "absent" are its states. cla...condition of that character, and to have arisen later in the e...t. phylogenetics -- Field of biology that deals with the relations...bsp; systematics -- Field of biology that deals with the diversity...2475 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
kallisto Transcript abundance quantification from RNA-se...notyping of known SNPs (dbSNP and Affymetrix's Genome-Wide Huma...mapper Minimap Lightweight and fast read mapper and read ove...rence-free SNP identification and estimatio...tware (Python) http://jordan.biology.gatech.edu/page/software/stri...2384 days ago
Single Cell RNAseq data analysis tutorial !!
A major breakthrough (replaced microarrays) in the late 00’s and has been widely used since Meas...ub.com/nghiavtr/BPSC Sincera: A Computational Pipeline for Single...tify human islet cell signatures and reveal cell-type-specific expression ch...jw156605/SLICER SinQC: A Method and Too...2364 days ago
Edit distance application in bioinformatics !
There are other popular measures of edit distance, which are...sertion, deletion, substitution, and the transposition o...) distance allows only insertion and deletion, not substitution;...ction. Text::LevenshteinXS and Text...imilarity takes two strings and ret...2354 days ago
Bioinformatics Web Application Development with Perl
Perl's second wave of adoption came from the growth of the wo...The old days of CGI programs and the simple development style...ng better, and the inventions and discoveries available in mode...Perl has dozens of frameworks and toolkits designed to make web..., such as CSS 3, web sockets, and HTTP 2....2334 days ago
