BBTools for bioinformatician !
...with names in your name list, and keeps the rest. To include them...Code: $ randomreads.sh ref=genome.fasta out=reads.fq len=100 re...ode, once the line hits zero, sequencing more is not useful.In cumulat...a out=mutant.fasta id=99 $ randomreads.sh ref=mutant.fasta out=reads...2278 days ago
Popular bioinformatics educational resources !
...i.a-star.edu.sg Bio research and development. Has course information and research information. Isb-si...ada. Workshops, certification and resources. Chickscope.beckma...From the Biology department and in cooperation with Boston Unive...l.gov/sci/techresources/Human_Genome/education/education.shtml A...2200 days ago
2167 days ago
2140 days ago
List of motif discovery tools !
In genetics, a sequence motif is a nucleotide or amino-acid s...Protein function prediction and annotation in an integrated e...es of key amino acid residues and map them on protein structure...on and ANalysis Tool Conduct genome wide functional and structura...pattern-recognition receptors and their...2000 days ago
CANU genome assembly parameters !
Choose the appropriate parameters to run Canu and run it. The assembly will tak...ptional, symbol | stands for "or". usage: canu [-c...ty assembly, example of a command that was used for testing can be...\ -d asm_test3 \ genomeSize=2m \ -maxThreads=2...1952 days ago
List of tools frequently used while genome assembly
List of tools frequently used while genome assembly: I have used the following assemblers Spades (v. 3.10.1)...18) Nanopolish (v. 0.8.3) I have used the following tools to assess genome ass...1937 days ago
Software for genome assembly !
List of bioinformatics tools/Software Website References for genome assembly: 1 Falcon&nbs...ps://github.com/bcgsc/arcs 6 Redundans reduction and scaffolding tool https://github....le copy gene markers http://busco.ezlab.org/ 10 Bandage gra...1351 days ago
10 NGS services companies around the globe !
...of the leading players in DNA sequencing and array-based technologies, ser...Inc. provides next generation sequencing services such as whole genome...ries, namely, BGI China (Mainland), BGI Asia Pacific, BGI Americas (No...Popular mentions – MedGenome (India), DNA Link, Inc. (South Ko...1267 days ago
Bioinformatics tools for telomere to telomere assembly !
...algorithm that leverages a pangenome reference built from haplotype-resolved genome assemblies in conjunction...d for processing Iso-Seq data and other long-read transcriptome data (Richard Kuo @GenomeRIK)● pbaa (PacBio A...ols for filtering, comparing, and annotating structural variant (S...999 days ago