Results for "Bonobo and Neandertal genome sequencing"

Blogs

  • BBTools for bioinformatician !

    ...with names in your name list, and keeps the rest. To include them...Code: $ randomreads.sh ref=genome.fasta out=reads.fq len=100 re...ode, once the line hits zero, sequencing more is not useful.In cumulat...a out=mutant.fasta id=99 $ randomreads.sh ref=mutant.fasta out=reads...

    2278 days ago

  • Popular bioinformatics educational resources !

    ...i.a-star.edu.sg Bio research and development. Has course information and research information. Isb-si...ada. Workshops, certification and resources. Chickscope.beckma...From the Biology department and in cooperation with Boston Unive...l.gov/sci/techresources/Human_Genome/education/education.shtml A...

    2200 days ago

  • Understanding liftOver !

    LiftOver is a necesary step to bring all genetical analysis to...three use cases: (1) Convert genome position from one genome ass...in NCBI build 36 (UCSC hg 18) and hope to lift them over to NCBI b...to another (3) Convert both genome position and dbSNP rs number over different v...

    2167 days ago

  • Installing Trinity !

    ...ng: comparison between signed and unsigned integer expressions...bool makefile_builder::subdir_and_target::operator<(const ma...ng: comparison between signed and unsign...cmds.txt ParaFly-0.1.0/test/rand_exit.pl checking for a BSD-comp...e under development) # # --genome_guided_bam :genome gui...

    2140 days ago

  • List of motif discovery tools !

    In genetics, a sequence motif is a nucleotide or amino-acid s...Protein function prediction and annotation in an integrated e...es of key amino acid residues and map them on protein structure...on and ANalysis Tool Conduct genome wide functional and structura...pattern-recognition receptors and their...

    2000 days ago

  • CANU genome assembly parameters !

    Choose the appropriate parameters to run Canu and run it. The assembly will tak...ptional, symbol | stands for "or". usage: canu [-c...ty assembly, example of a command that was used for testing can be...\ -d asm_test3 \ genomeSize=2m \ -maxThreads=2...

    1952 days ago

  • List of tools frequently used while genome assembly

    List of tools frequently used while genome assembly: I have used the following assemblers Spades (v. 3.10.1)...18) Nanopolish (v. 0.8.3) I have used the following tools to assess genome ass...

    1937 days ago

  • Software for genome assembly !

    List of bioinformatics tools/Software Website References for genome assembly: 1 Falcon&nbs...ps://github.com/bcgsc/arcs 6 Redundans reduction and scaffolding tool https://github....le copy gene markers http://busco.ezlab.org/ 10 Bandage gra...

    1351 days ago

  • 10 NGS services companies around the globe !

    ...of the leading players in DNA sequencing and array-based technologies, ser...Inc. provides next generation sequencing services such as whole genome...ries, namely, BGI China (Mainland), BGI Asia Pacific, BGI Americas (No...Popular mentions – MedGenome (India), DNA Link, Inc. (South Ko...

    1267 days ago

  • Bioinformatics tools for telomere to telomere assembly !

    ...algorithm that leverages a pangenome reference built from haplotype-resolved genome assemblies in conjunction...d for processing Iso-Seq data and other long-read transcriptome data (Richard Kuo @GenomeRIK)● pbaa (PacBio A...ols for filtering, comparing, and annotating structural variant (S...

    999 days ago