Results for "Breakpoint"
Users
About me: ...oinformatics and computational biology, I mainly focus on chromosomal breakpoint and amniotes evolution. I (We...l/en/theses/computational-identification-and-analysis-of-evolutionary-breakpoint-regions-in-amniote-genomes(57...Interests: Chromosomal Breakpoints11 days ago
Blogs
Dynamic chromosome breakpoints !!!
...of the resulting recombined molecules happens. The “chromosomal breakpoints” refers to these place...nfo%3Adoi%2F10.1371%2Fjournal.pcbi.0020014). In addition the study of breakpoint regions and non-breakpoint (s...3553 days ago
- ...encing based tests in multi-gene testing. We will also show how NGS based tests help to identify copy number variations, split read analysis and breakpoint identification. Finally, we w...
2804 days ago
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Bookmarks
InfoGenomeR: Integrative reconstruction of cancer genome karyotypes
...eR is the Integrative Framework for Genome Reconstruction that uses a breakpoint graph to model the connectivi...lele-specific CNAs, and haplotype information to identify the optimal breakpoint graph representing cancer gen...1097 days ago
Comparative genomics educational material and papers bookmarks
...ary Information) identified homologous synteny blocks (HSBs). Using porcine HSBs and stringent filtering criteria, 192 pig-specific evolutionary breakpoint regions (EBRs) were located....2734 days ago
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Top-level pages
Some useful Bioinformatics links
Reference-free prediction of rearrangement breakpoint reads | Bioinformatics | Oxford Academic https://academic.oup.com/bioinformatics/article/30/18/2559/2475628 Reference-free SNP de...2242 days ago
Wire posts
Bio-Scripts
- ...sniffles [ 57%] Building CXX object src/CMakeFiles/sniffles.dir/tree/Breakpoint_Tree.cpp.o [ 58%] Building C...otyper/Genotyper.cpp: In member function ‘void Genotyper::update_file(Breakpoint_Tree&, breakpoint_node*&)’:...
2099 days ago
Tags
- The laboratory is focused on the discovery and analysis of structural variation (SVs) from genomic sequence data. As part of the 1000 Genomes Project and other endeavors, we have helped produce initial fine-scale maps using a variety of SV discovery approaches including: (i) paired-end mapping (o...
Tags: Bioinformatics, Gene, Epigenomics, Structure Variation, Deletion, Breakpoint, Chromosome
2993 days ago
Comments
Comment on "Sibelia: A comparative genomics tool"
...e Comparison Tool" (poster), WABI 2012 http://bioinf.spbau.ru/sites/default/files/SyntenyFinder.pdf 2. Max A. Alekseyev and Pavel A. Pevzner. "Breakpoint graphs and ancestral genome...1286 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
...mple to handle, needs to be set) and (iii) it provides a rich set of graphic outputs (notably an interactive synteny map that allows zooming in breakpoint regions).1595 days ago
