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Five unique traits of effective computational biologist
Bioinformatics research is driven by large set of software, scripts, and tools to analyse gigantic biological data. Being a grea...results and explain it biologically. 2. Not a merely coder!!...every question I posted on Stack Overflow or the BioStars for...3960 days ago
How to install Perl modules manually, using CPAN command, and other quick ways
As a bioinformatics programmer, and crunchy data analyser you need....36.tar.gz to /home/download# cd /home/download# gzip -d XML-...ti/usr/lib/perl5/5.10.0/usr/local/lib/perl5/site_perl/5.10.0/...bsp; : perl-CPAN &nb...3960 days ago
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Well designed regular expression cheat sheet
In our computational biology work, we mostly play with DNA or AA string. For string based programming work this regular expression cheat sheet is really helpful. Keep it handy.3959 days ago
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Regular Expression Cheat Sheet
...egular Expression are the sole of Perl language, and for bioinformatician it is just a magical stick to resolve gingatic s...data. We did not find any good and user friendly regular expression cheat sheet, hence write our ow...3962 days ago
Which are the best statistical programming languages to study for a bioinformatician?
In Bio-informatics based genome sequencing and predicting metabolic pathways research jobs I used Matlab, SAS, SPSS, R and several Bioconductor packages. Matlab had...ink is best? or there might not be one specific language but a few that l...3961 days ago
Selecting between Python 2 and Python 3?
Which version is best for bioinformatician to work on?3961 days ago
Bio++ : C Language libraries for your biological need
...s for easy implementation, it comes with a genuinely useful standard library that can itself be implemented in C,...etting and framework (that of C). When C++ was created, one o...io++. J Now the time has been change, the biological programm...d) substitution mapping.Sequences simulation under any substi...3957 days ago
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Donnelly Centre of Cellular & Biomolecular Research (CCBR), Bader Lab
...anization and evolution of biological systems using computational biology and bioin...formatics techniques. We seek to accurately predict links, such a...systems using comprehensive genomics data like genome sequence an...tion and analysis software. Predicting biologically relevant pro...3957 days ago
3929 days ago
Bioinformatician become producer/director !!!
If a Bioinformatician starts producing Hindi Bollywood movies, na...Genefinder. Har Ligand jo dock karega. Alignment to hona h...re Paas Hai Aao Database Search Kare Bioinformatician No.1...quence Parayi *Warning: It contain hindi words.3928 days ago
Perl Poem: Parse it in both Perl and English!
Larry's, er, corpus has fortunately been overshadow...resented at the Usenix Winter 1992 Technical Conference, entitled "Camels and Needle...ollowing poem published in both the Economist and the Guardian: #!/...close them, yet. accept (yourself, changes),bind (grief, despair);...3928 days ago
Personalised Medicine - Animation
Two animated case scenarios set now and in the future. These highlight potential differences in the way patients are treated now, and how they might be treated as healthcare becomes more tailored.3914 days ago
Influenza animation - flu virus mechanism
Animation of the mechanism of an influenza virus and how Crucell's antibodies target the HA1 proteins o...s and prevent further spread of influenza. Client: Crucell Direction, Desi...rm Music & Sound Design: Javier Barrero, Logical Disorder Production Company...3862 days ago
Install BLAST in Ubuntu/Linux and Window !
#On ubuntu sudo apt-get install ncbi-blast+ #Ubuntu Conda installation conda install -c bioconda blast #Windows install...ad ftp://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.7.1/ncbi-blas...ih.gov/blast/executables/blast+/2.7.1/ncbi-blast-2.7.1+-win64.exe #...1156 days ago
2926 days ago
Which of the following programming language is best for a bioinformatics beginner?
I will be doing NGS in the course of my research work and I will like to learn a programming language which is compatible with most bioinformatics tools or softw...ly, map reads, align reads, and expression analysis. Recommendations welcomed. Which l...3540 days ago
Which math/statistics programming language/application do you most frequently use in bioinformatics?
I'm doing a bit more statistical analysis on some bioinformatics things lately, and I'm curious if there are any programming languages that are particularly good for this NGS computation. What suggestions do you guys have? Are there any languages that have exceptionally good libraries?3536 days ago
Interview with a bioinformatician series ...
The aim of this series to interviews some notable bioinformaticians to get their views on various aspects of bioinformatics research. H...lly these answers will prove useful to others in the field, especially to those who are just st...3426 days ago
Tryst with a Bioinformatician # Dr Altan Kara
...r Altan Kara is a Bioinformatics specialist at the faculty of Gene Engineering and Biotechnology Institute at TUBITAK M...aims for the development of a computational method to design...lready a massive need for effective methods to eliminate the...2372 days ago
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Skills: Biotechnology, Bioinformatics. Creative writting, Perl, C, C++
3372 days ago
Skills: C, C++, Java, SQL, Perl, HTML etc.
3609 days ago
Comment on "Benchmarking Perl Module !"
Benchmarking a Perl module involves measuring the performance of the module in terms of its execution time and memory usage. T...ction(); } Run the benchmark: Call the timethese func...chmark using the timethese function from the Benchmark module...425 days ago
Comment on "A quick guide to Phred scaling"
...probability of an error in each base call in a sequencing re...from 0 to 60. The higher the score, the more confident we are...increase of 10 in the Phred score corresponds to a 10-fold d...score is represented as an ASCII character, with the charact...425 days ago