Results for "C"
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Run bash script in Perl program !
BioPerl is a compilation of Perl modules that can be used to build bioinformatics-related Perl scripts. It is...asier to perform different functions. Despite the fact that P...but never returns true. 3. Backticks “ or qx// syntax...com/snippets/view/42920/perl-script-to-run-awk-inside-perl 6...651 days ago
Ancient whole genome duplication (WGD) detection tools !
There are two methods for ancient WGD detection, one is collinearity anal...synonymous substitutions at each non-synonymous site. At pre...tle troublesome to install, because it depends on a lot of so...2) Download the tutorial for CDS and GFF annotation files...1169 days ago
List of useful machine / ai learning resources !
ML cheatsheet ! https://github.com/remicnrd/ml_cheatsheet Visual AI / ML https://setosa.io/ev/ Simple and efficient tools for predictive data analysis https://scikit-learn.org/stable/1146 days ago
Innovative blog and portfolio website!
...one else's beautiful, responsive portfolio website links and wishing you could create one for yourself?So ther...hour! Here is the list of useful pages to mativate you https://brittanychiang.com/ https://ashutosh19...1062 days ago
Frequently used bioinformatics tools for viral genome analysis !
IVA: accurate de novo assembly of RNA vi...Kellam P, Otto TD. Bioinformatics. 2015 Jul 15;31(14):2374-6. doi: 10.1093/bioinformatics/btv120. Epub 2015 Feb 28. A...nome Res. 22, 557-67 (2012). KMC: Disk-based k-mer counting on...age and environment for statistical computing. R Core Team (201...1061 days ago
Bioinformatics tools for telomere to telomere assembly !
...er-based assembly and variant calling evaluation for improved consensus accuracy (Arang Rhie)...type a wide spectrum of genetic variation (Tobias Marschall)●...ash; software designed for processing Iso-Seq data and other...ash; tool for de Bruijn graph construction (Anton Bankevich&n...1006 days ago
Levenshtein and Damerau-Levenshtein distance !
Levenshtein Distance Also known as Edit Distance, it is the number of transformat...ions) required to transform a source string into the target one....is “book” and the source is “back”, you w...to implement, and it is a popular challenge during code interview...964 days ago
- ...presentational State Transfer (REST) sample clients are provided for a numb...mming languages. For details of how to use these clients, download the...ils see Environment setup for REST Web Services and Examples for...
958 days ago
Basic Structure of Snakemake Pipeline Run !
/user/snakemake-demo$ ls config.json data envs scripts slurm-240702.out Snakefile data = mock data for the snakefile to us...at snakemake looks for in the current working directory is th...f the jobs to be run without actually executing them. snakem...948 days ago
Classification of SARS-CoV2 Variant !
The scientists established some guidelines for...g whether a variant is a legitimate branch of an existing lineage: The...ould be transmitted from its original location to another "geographical...y or a province of a large and populous country.It should differ from i...905 days ago
