Comment on "Run miniasm assembler on nanopore reads !"
...–x ava-ont \ ../../trimming_practical/nanofilt/nanofilt_trimmed.fastq \ ../../trimming_practical/nanofilt/nanofilt_trimme...z miniasm -f \ ../../trimming_practical/nanofilt/nanofilt_trimme..../miniasm.fasta dnadiff -p dnadiff ~/course_data/precompiled/chr17.f...792 days ago
Comment on "Spades tutorial PDF"
Spades tutorial http://cab.spbu.ru/files/release3.11.1/manual.html#yaml804 days ago
Comment on "CrossMap: program for genome coordinates conversion between different assemblies"
https://www.researchgate.net/publication/357925950_FastRemap_A_Tool_for_Quickly_Remapping_Reads_between_Genome_Assemblies827 days ago
Comment on "Run multiple bash command in screen !"
srun --partition=compute --nodes=1 --ntasks-per-node=40 --pty bash833 days ago
Comment on "ncbi-datasets-cli -- Quickstart: command line tools !"
(base) [jnarayan@hn1 TOOLS]$ curl -o datasets 'https://ftp.ncbi.nlm.nih.gov/pub/datasets/comm...inux-amd64/datasets' % Total % Received % Xferd Average Speed Ti...425k(base) [jnarayan@hn1 TOOLS]$ curl -o dataformat 'https://ftp...558k(base) [jnarayan@hn1 TOOLS]$ chmod +x datasets dataformat...876 days ago
Comment on "Extract the values using ids !"
Join could be also useful linux_prompt> join file1 file2 11002 item 6 10995 item 7 79600 item 7891 days ago
Comment on "Install composer for ELGG"
php -r "copy('https://getcomposer.org/installer', 'composer-setup.php');" php -r "if (hash_file('sha384', 'composer-setup.php') === '906a84df04cea2aa72f40b5f787e49f22d4c2f19492ac310e8cba5b96ac8b64115ac402c8cd292b8a03482574915d1a8')...898 days ago
Comment on "BBTools for bioinformatician !"
Latest download link at https://sourceforge.net/projects/bbmap/files/BBMap_38.94.tar.gz More at https://sourceforge.net/projects/bbmap/files/914 days ago
Comment on "How to install Perl modules manually, using CPAN command, and other quick ways"
If you are on Conda, you can try installing cpamn https://anaconda.org/bioconda/perl-app-cpanminus and then cpanm install <name>933 days ago
Comment on "Far Manager Commands and Links !"
We press the combination Alt keys+ F1 or Alt + F2, in the menu that opens, select NetBox, it is under the number 2. Now we need to create a connection to our serv...rver IP: 127.0.0.1, port 22As suggested to create a new session, press Shi...936 days ago