Results for "CA"
Users
About me: ...algorithms to harness the huge amount of biological data (genomes, epigenomes, t...omes, proteomes, etc.) to answer specific biological questions pertaining to thes...http://scholar.google.co.uk/citations?user=ySm4BzcAAAAJ&hl=en ResearchGate @...18 days ago
- About me: I am a trained bioinformatician from UK. My core area of interest are computation cancer genomics and bioinformatics software development.Interests: Biological Coding
3961 days ago
- +48 more Users
Blogs
Five unique traits of effective computational biologist
...ls to analyse gigantic biological data. Being a great biological programmer or bioinformatici...ng code. There are some technically skilled biological program...duce working codes, not technical research perfections. But, t...ry good and even great biological programmers operating at med...3959 days ago
How to install Perl modules manually, using CPAN command, and other quick ways
...module is not installed, application will display the followin...ing Makefile.PL, remember the case sensitivity, make and make...ot found# perl -MCPAN -e shellCan't locate CPAN.pm in @INC (@I...g parameters...CPAN build and cache directory? [/root/.cpan]Do...3958 days ago
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Bookmarks
- Bioinformatics is developing very rapidly. With new tools and software it is, now a days, easy to analyse the large scale genomics datasets. But we need to understand the background...
3953 days ago
Online Courses for biology beginners
Most of the time we face some biological problems while analysing our data computationally. This bookmark is being created to provide list of all free online courses at one place. If you know any other good online cource resources to learn biology please let me know.3952 days ago
- +982 more Bookmarks
Files
- In an attempt to find a good Linux reference for bioinformatician and BOL readers, I was unsuccessful at finding a decent one on the Internet. So, we decided to make a cheat sheet for biological programmers.
3961 days ago
Regular Expression Cheat Sheet
The Regular Expression are the sole of Perl language, and for bioinformatician it is just a magical stick to resolve gingatic string data. We did not find any good and user friendly...3961 days ago
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Discussion topics
Which are the best statistical programming languages to study for a bioinformatician?
In Bio-informatics based genome sequencing and predicting metabolic pathways research jobs I used Matlab, SAS, SPSS, R and several Bioconductor package...3960 days ago
- Like in case of plant genomes where nature of genome is too complex and huge in size to accomplish complete de novo assembly by current sequencing technology. What would be alternate solution? Can we live in reference free world?
3953 days ago
- +4 more Discussion topics
Pages
Bio++ : C Language libraries for your biological need
...in which powerful expressions can be coded. C was widely distr...C/C++ language for the biological programming? If yes there is...e has been change, the biological programmers are ready to use...ge disequilibrium.etc. Numerical calculus Numerical tools: e...3956 days ago
- ...Lisp, Dylan, Pike, and CLU. The standard 1.8.7 implementation is written in C, as a single-pass interpreted language. There is currently no specification of the Ruby language, so...
3956 days ago
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Top-level pages
- ...esearch, development, or application of computational tools an...inguistics. It has many practical applications in different ar...onal functionality, e.g. they can search for similar articles...he near future. Protein folds can be analysed for whole genome...
3955 days ago
- ...strategies of high-throughput DNA sequencing, so called the “high-throughpu...cost and desire to explore and understand biological machanism at genomic level,...develope sotware/tools bioinformatician/ biological programmers need to expertis...
3956 days ago
- +106 more Top-level pages
Wire posts
News
- The ongoing genomic research in USA contributed $31 billion to the U.S. gross national product and helped support 152,000 jobs. Reference: http://www.unitedformedicalresearch.com/wp-content/uploads/2013/06/The-Impact-of-Genomics-on-the-US-Economy.pdf
3961 days ago
- ...to the R user community - and DSC - a platform for developers of statistical software. Recently useR! conference have been organized University of Castilla-La Mancha, Albacete, Sp...
3960 days ago
- +177 more News
Opportunity posts
- ...hD Students (E 13 TV-L) for applicants interested in performing h...ring, database systems, and theoretical computer science as well as...an individual mentoring and qualification approach are arranged wit...rtion of women in research. Applications from women are particula...
3956 days ago
- ...Advertisement NO.14/2013 Applications/Biodata/CV are invited f...e projects. Interested and eligible candidates may mail their Biodat...(consolidated). Essential Qualifications: Ph.D. in Bioinformatics...n pathogenesis as evident from publication(s) in reputed journal(s)....
3953 days ago
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ResearchLabs posts
Donnelly Centre of Cellular & Biomolecular Research (CCBR), Bader Lab
...e study the organization and evolution of biological systems using computational...find how these links are rewired by mutations to cause disease. This work is supp...ed through the development of open-source biological pathway and network database...3956 days ago
- ...er understand how living systems respond to chemical agents. A key aspect of our...tively use of vast and diverse amounts of biomedical knowledge. We are particular...rested in understanding how the response to chemical exposure is modulated by gen...
3956 days ago
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Fun
Bioinformatician become producer/director !!!
...mbari Structure Dus Numbari GCG Karo Sajana Naukar NCBI Ka 1942 -- A KEGG Story Algorithm Se Program Tak Haan Maine Bhi ClustalW Kiya Hai GeneScan Karke Dekho Alignment Apna...3927 days ago
Perl Poem: Parse it in both Perl and English!
...n Hopkins. She has written quite a few Perl poems, as well as a paper on Perl poetry that she presented at the Usenix Winter 1992 Technical Conference, entitled "Camels and Needles: Computer Poe...3927 days ago
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Video
Personalised Medicine - Animation
Two animated case scenarios set now and in the future. These highlight potential differences in the way patients are treated now, and how they might be treated as healthcare becomes more tailored.3912 days ago
Influenza animation - flu virus mechanism
...prevent further spread of influenza. Client: Crucell Direction, Design & Animation: Daniel Lim, 2Preform Music & Sound Design: Javier Barrero, Logical Disorder Production Company:...3861 days ago
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Bio-Scripts
- #!/usr/bin/perl use strict; use warnings; #assign strings to variables my $DNA = "GATTACACAT"; my $polyA = "AAAA"; #concatenate two strings my $modifiedDNA = $DNA.$polyA;...
2925 days ago
Count the frequency of base G in a given DNA sequence
#!/usr/bin/perl use strict; use warnings; my $DNA = "GATTACACAT"; #initialize $countG and $currentPos my $countG = 0; my $currentPos = 0; #calculate the length of $DNA my...2925 days ago
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Polls
Which of the following programming language is best for a bioinformatics beginner?
...the course of my research work and I will like to learn a programming language which is compatible with most bioinformatics tools or software. I basically want to do de-novo assembl...3539 days ago
Which math/statistics programming language/application do you most frequently use in bioinformatics?
I'm doing a bit more statistical analysis on some bioinformatics things lately, and I'm curious if there are any programming languages that are particularly good for this NGS computation. What suggestions do you guys have? Are there any languages that have exceptionally good libraries?3535 days ago
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Tryst
Interview with a bioinformatician series ...
...formatics research. Hopefully these answers will prove useful to others in the field, especially to those who are just starting their bioinformatics careers.This series will be avai...3425 days ago
Tryst with a Bioinformatician # Dr Altan Kara
...s the center of modern biological research and if a researcher...I am working in the field of cancer bioinformatics. Briefly,...faced so far in my scientific career was predicting the intera...searcher with a strong biological background can be able to pe...2370 days ago
Groups
Bioinformatics as a business, not to be confused with bioinformatics as a field of study, is at an interesting crossroads. As an academic branch of learning, bioinformatics remains...3961 days ago
...rom which you have drunk, a "genome hacker" could obtain a comprehensive scan of your genome, revealing DN...atician you hack the entire genome to understand the god's written sophiticated genetic codes. Here we wil...3961 days ago
- +17 more Groups
Tags
Bioinformatics Scientist, Production Bioinformatics @ South San Francisco, CA
wist is looking for a Bioinformatics Scientist to join our Production Bioinformatics Team. You will work alongside research scientists, software engineers and data scientists to further deliver on our mission to expand access to best-in-class synthetic biology and next-generation sequencing appli...Tags: Bioinformatics, Scientist, Production, Bioinformatics, South, San, Francisco, CA
998 days ago
Comments
Comment on "Benchmarking Perl Module !"
...ecution time and memory usage. This can be done using the Perl Bench...the Benchmark module installed, you can install it using the followi...mple of a benchmark subroutine that calls a function from a hypothet...the average time per iteration. You can use these results to compare...424 days ago
Comment on "A quick guide to Phred scaling"
...lity of an error in each base call in a sequencing read. Here is a quick guide to Phred scaling: Phred quality score...e of 10 corresponds to a base call accuracy of 90%, while a Ph...The Phred score for each base call is calculated as follows:...424 days ago
- +403 more Comments
