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Results for "CheckM"

Blogs

• • BioStar@biostar

  

  List of tools frequently used while genome assembly

  ...opolish (v. 0.8.3) I have used the following tools to assess genome assembly characteristics ANI.pl (https://github.com/chjp/ANI) CheckM (v. 1.0.7) Prokka ...

  1943 days ago

Bookmarks

• • Rahul Nayak@rahul

  

  CheckM:Assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes

  CheckM provides a set of tools for assessing the quality of genomes recovered from is...ch highlight sequences outside the expected distributions of a typical genome. CheckM also provides tools for ident...

  2187 days ago

Wire posts

• • BioJoker@biojoker

  

  #CheckM provides a set of tools for #assessing the #quality of #genomes recovered from isolates, single cells, or #metagenomes. http://ecogenomics.github.io/CheckM/

  1957 days ago

Tags

• • Rahul Nayak@rahul

  

  CheckM:Assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes

  CheckM provides a set of tools for assessing the quality of genomes recovered from isolates, single cells, or metagenomes. It provides robust estimates of genome completeness and contamination by using collocated sets of genes that are ubiquitous and single-copy within a phylogenetic lineage. Ass...

  Tags: CheckM, Assessing, quality, microbial, genomes, recovered, isolates, single, cells, metagenomes, Validation

  2187 days ago

• • BioJoker@biojoker

  

  #CheckM provides a set of tools for #assessing the #quality of #genomes recovered from isolates, single cells, or #metagenomes. http://ecogenomics.github.io/CheckM/

  Tags: CheckM, assessing, quality, genomes, metagenomes

  1957 days ago

Comments

• • Neelam Jha@neelam

  

  Comment on "CheckM:Assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes"

  CheckM for Metagenome https://linsalrob.github.io/ComputationalGenomicsManual/CheckM/

  649 days ago