How to install Perl modules on Mac OS X in easy steps !!
...r/bin/make or the value returned when you run which make from the command line) and your choice of CPAN mirrors (which you actually choose don’t really matter, bu...2764 days ago
Bioinformatics tools developed for Oxford Nanopore data analysis !
...sumable flow cell can now generate 10–20 Gb of DNA sequence data. Ultra-long read lengths are possible (hundreds of kb) as you can choose your fragment length. On...2330 days ago
Setting python version as default on Linux
...ate-alternatives --config python This last command will allow you to choose which version of python to us...orrectly, python2.6 should already be set as the default. If it is not, choose it to be the default. From no...2079 days ago
CANU genome assembly parameters !
Choose the appropriate parameters to run Canu and run it. The assembly will take about an hour. You can use two cores (parameter -maxThreads=2) and you would like...1954 days ago
Protocol for De novo Genome Assembly using Illumina Reads
...g machine (s). Look at the readings - have an idea of what you have and what the standard is like. If required, raw data cleanup/quality trimming. Choose an adequate parameter set for...1214 days ago
Run bash script in Perl program !
...(described as follows), which are unique in their own way. They vary slightly from one another, making it difficult for Perl beginners to choose between them. 1. IPC...647 days ago
Common steps for reads mapping !
...re are some general steps to follow for mapping reads to a genome: Choose a read mapper: There are many read mappers available, such as BWA, Bowtie, and HISAT2. Choose a mapper that is appropriate...433 days ago
Calculate the significance of the difference between two trends
...-test or ANOVA. The test statistic will depend on the specific test you choose, but it will generally compar...t the specific details of each step will depend on the type of test you choose and the software you use to p...428 days ago