CHSMiner: a GUI tool to identify chromosomal homologous segments
Background The identification of chromosomal homologous segments (CHS) within and between genomes is essential for comparative genomics. Various processes including insertion/deletio...2367 days ago
2365 days ago
Indexcov: fast coverage quality control for whole-genome sequencing
...cov, an efficient estimator of whole-genome sequencing coverage to rapidly identify samples with aberrant coverage profiles, reveal large-scale chromosomal anomalies, recognize potentia...2083 days ago
2053 days ago
HumCFS: a database of fragile sites in human chromosomes
Fragile sites are specific chromosomal region that exhibit an increased frequency o...licative stress. Since from the discovery of chromosomal fragile sites/regions (CFS),...enous oncogenic DNA viruses and hotspots for chromosomal re-arrangement. There is larg...1848 days ago
chromoMap-An R package for Interactive Visualization and Annotation of Chromosomes
chromoMap provides interactive, configurable and elegant graphics visualization of chromosomes or chromosomal regions allowing users to map chromosome elements (like genes,SNPs etc...1709 days ago
U-Plot: Genome U-Plot sample implementation
The Genome U-Plot is a JavaScript tool to visualize Chromosomal abnormalities in the Human Genome using a U-shape layout.1532 days ago
809 days ago
Severus: a somatic structural variation (SV) caller for long reads
...and complete somatic and germline calls. Severus takes advantage of long-read phasing and uses the breakpoint graph framework to model complex chromosomal rearrangements. If you use S...43 days ago
7 days ago