Can you recommend me some interactive tools to visualize chromosomes?
I am looking for new, interactive and user friendly tools to see chromosomal rearrangements. I tried IGV, but it does not seems to be very helpful for chromosomal rearrangements visualization. Circos look pretty useless, as it does not allow me to explore well. Help Please...Tags: Bioinformatics, Visualize, Chromosome, See, View, Genome, Tools
2627 days ago
Tags: Bioinformatics, Analysis, Assembly, Genome, Chromosome, Plot, Phenome
2609 days ago
Pacbio Long Reads Compatible Software and Tools
The following software packages are known to be compatible with PacBio® data, in addition to PacBio's own SMRT® Analysis suite. All packages are believed to be open source or freely available for non-commercial use. See the individual project sites for up-to-date license information. A se...Tags: Bioinformatics, Chromosome, Genome, NGS, Align, LongReads, LR, Reads, Pacbio
2601 days ago
ChromHMM: Chromatin state discovery and characterization
ChromHMM is software for learning and characterizing chromatin states. ChromHMM can integrate multiple chromatin datasets such as ChIP-seq data of various histone modifications to discover de novo the major re-occuring combinatorial and spatial patterns of marks. ChromHMM is based on a multivaria...Tags: Bioinformatics, ChromHMM, Chromatin, Discovery, Characterization, Chromosome
2566 days ago
Tags: Nicola Crosetto, Magda Bienko, Lab, Chromosome, DNA, Bioinformatics, Histone, Omics, Tumor
2543 days ago
Tags: CViT, Chromosome, Viewing, Tool
1943 days ago
EyeChrom: Visualizing Chromosome Count Data From Plants
It's goal is to show chromosmal data per genus. Select the genus, and the plot will show the records found for it in the Chromosome Counts Database. note: Report an issue via Gihub: github.com/roszenil/CCDBcurator and github.com/RodrigoRivero/EyeChrom https://bsapubs.onlinelibrary.wiley.com/doi/...Tags: EyeChrom, Visualizing, Chromosome, Count, Data, From, Plants
1937 days ago
Tags: Beatriz, Vicoso, Sex, Chromosome, Evolution, X, Genome
816 days ago
Tags: Bioinformatics, Alignment, NGS, Visualize, See, View, Genome, chromosome, GenomeComp
2627 days ago
Tags: Bioinformatics, Alignment, NGS, Visualize, See, View, Genome, chromosome, sockeye, 3D
2627 days ago