BBTools for bioinformatician !
...ll end up in "unmatched.fq". Specifically, the command means "look for 25-mers in...m I/O. Personally, I never use BBDuk2 from the command line. Both have identical c...rom multiple files simultaneously, if they are comma-delimited (e.g. in=file1.fast...2264 days ago
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Rcorrector: efficient and accurate error correction for Illumina RNA-seq reads
...: perl run_rcorrector.pl [OPTIONS] OPTIONS: Required -s seq_files: comma separated files for single-end data sets -1 seq_files_left: comma separated files for the first...1545 days ago
A guide for complete R beginners :- R Syntax
...ions, are in brackets. Note that all dat and options are separated by a comma Function(data, options)...ble Hint: Up/Down arrow keys can be use to cycle through previous commands...3351 days ago
A guide for complete R beginners :- Getting data into R
...If any of these are false, we need to tell that to the function If it has a header column mydata header=T also works Note that there is a comma between different parts of th...3351 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...r of SRA and other NCBI resources; command-line or via web, can fetch...glfMultiples Description: command-line, variant caller Input...tailored to Oxford Nanopore Reads; command line program Input: FASTQ...x Trait Analysis; package program, command line interface; estimates v...2902 days ago
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Installing Porechop on Ubuntu !
...determine which adapter sets are present (default: 10000) --scoring_scheme SCORING_SCHEME Comma-delimited string of alignment...2099 days ago