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Setting python version as default on Linux
...ed. You'll next need to execute the following commands: sudo apt-get insta...ate-alternatives --config python This last command will allow you to choose whic...you'll get an error message if you've run the commands above. To update these packa...2084 days ago
CANU genome assembly parameters !
...bsp;Canu run produces usually high quality assembly, example of a command that was used for testing can...reports generated by the assembler, or calculated using standard UNIX command line tools. More at htt...1959 days ago
- ...t’s like flex/lex, from the command-line, perfect for text-proces...# You can assign FS either on the command line (-F C) or in your BEGIN...print assoc[key]; # The command line is in a special array ca...dard input, not from files on the command line getline name < "...
1849 days ago
List of perl special symbols !
...;CDROM tray not closed’ $? Exit status from last process $AGRV – name of current file @ARGV – command line arguments $ARGV – special file handle for command line filenames $. – cu...1573 days ago
Protocol for De novo Genome Assembly using Illumina Reads
...Scripthttps://bioinformaticsonline.com/snippets/view/42542/trimmomatic-command Genome Assembly:The object o...ttp://www.jcvi.org/cms/research/projects/annotation-service/ Frequent command use for the analysis are at:...1218 days ago
Run bash script in Perl program !
...ers to execute certain Unix/shell commands in Perl script, so it's hard...ors for the execution of external commands (described as follows), whic...hes first, returns false when the command is not found, but never retur.... system() syntax: system( "command" ); It is also a Perl functi...651 days ago
- ...o your Ubuntu 20.04 server, run the following command to update your base system wi...ou can install all of them with the following command: apt-get install apache2 mar...xit from the MariaDB shell with the following command: FLUSH PRIVILEGES; EXIT; A...
725 days ago
- SLURM commands The following table shows SLURM commands on the SOE cluster. CommandDescription sbatch Sub...our job is using, you can run commands sacct or ssta...-format=list The command below, for example, provides...
683 days ago
Common steps for reads mapping !
...rimmed before mapping. Run the mapper: The mapper is run with the command-line interface or using a graphical user interface. The specific command depends on the mapper being u...437 days ago
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