Taverna Workflow Management System
Taverna is an open source domain independent Workflow Management System – a suite of tools used to design and...r (which allows remote execution of workflows). Taverna is also available as a Comma...3909 days ago
3646 days ago
Ten recommendations for creating usable bioinformatics command line software
Bioinformatics software varies greatly in quality. In terms of usability, the command line interface is the first experience a user will have of a tool....t time a tool will be used. Here I present ten recommendations for comma...3612 days ago
UCSC Genome Browser and Blat software !
This directory contains Genome Browser and Blat application binaries built for standalone command-line use on various supported Linux and UNIX platforms. To dete...rmine which set of binaries to download, type "uname -a" on the comma...2992 days ago
2921 days ago
Linux command line exercises for NGS data processing
The purpose of this tutorial is to introduce students to the frequently used tools for N...en to manipulate NGS data as compared to the other command line tools such as grep, sed, perl etc. Furthermore, having a comma...2867 days ago
2860 days ago
VAGUE:Velvet Assembler Graphical Front End
VAGUE is a vague acronym for "Velvet Assembler Graphical Front End", which means it is a GUI for the Velvet de novo assembler. The comma...2620 days ago
2757 days ago
Entrez Direct: E-utilities on the UNIX Command Line
Entrez Direct (EDirect) is an advanced method for accessing the NCBI's suite of intercon...terminal window. Functions take search terms from command-line arguments. Individual op...tions. Queries can move seamlessly between EDirect comma...2748 days ago