Results for "Comparative"

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  • JCVI:Python utility libraries on genome assembly, annotation and comparative genomics

    Collection of Python libraries to parse bioinformatics files, or perform computation related to assembly, annotation, and comparative genomics. https://github.com/tanghaibao/jcvi More at https://github.com/tanghaibao/jcvi/wiki

    Tags: JCVI, Python, utility, libraries, genome, assembly, annotation, comparative, genomics, synteny, plots

    1508 days ago

  • Coronavirus Resources !

    2019nCoVR features comprehensive integration of genomic and proteomic sequences as well as their metadata information from the GISAID, NCBI, NMDC and CNCB/NGDC. It also incorporates a wide range of relevant information including scientific literatures, news, and popular articles for science disse...

    Tags: Corona, virus, China, Resources, CoVID, covid, china, genome, assembly, dna, rna, sequences, evolution, study, comparative, genomics

    1457 days ago

  • Beginner’s guide to #comparative #bacterial #genome analysis using next-generation sequence data https://microbialinformaticsj.biomedcentral.com/articles/10.1186/2042-5783-3-2

    Tags: comparative, bacterial, genome

    1421 days ago

  • Sibelia: A comparative genomics tool

    Sibelia: A comparative genomics tool: It assists biologists in analysing the genomic variations that correlate with pathogens, or the genomic changes that help microorganisms adapt in different environments. Sibelia will also be helpful for the evolutionary and genome rearrangement studies for mu...

    Tags: Sibelia, comparative, genomics, tool, synteny

    1351 days ago

  • Bioinformaticians in comparative and evolutionary genomics

    NBIS is now looking for a new member to support Swedish research in evolutionary, comparative, and population genomics, with a particular focus on conifer genomics. Your tasks will consist of: Advanced bioinformatics analyses within research projects across Sweden, including key involvement...

    Tags: Bioinformaticians, comparative, evolutionary, genomics, Sweden, NBIS, SciLifeLab

    641 days ago

  • gggenomes: A grammar of graphics for comparative genomics

    gggenomes is a versatile graphics package for comparative genomics. It extends the popular R visualization packageggplot2 by adding dedicated plot functions for genes, syntenic regions, etc. and verbs to manipulate the plot to, for example, quickly zoom in into gene neighborhoods.

    Tags: gggenomes, grammar, graphics, comparative, genomics, view

    1187 days ago

  • postdoctoral fellow for a large-scale microbial comparative genomics !

    Asaf Levy hiring a postdoctoral fellow for a large-scale microbial comparative genomics project at the Hebrew University of Jerusalem (Israel). The project is a continuation of Levy Asaf et al. Nature Genetics 2018 paper. Requirements: 1.Experience with programming in at least one programmin...

    Tags: postdoctoral, fellow, large-scale, microbial, comparative, genomics

    1100 days ago

  • GEnView: A phylogeny based comparative genomics software to analyze the genetic environment of genes

    A phylogeny based comparative genomics software to analyze the genetic environment of genes. The user can select one or several taxa and provide one or several reference protein(s). Genomes and plasmids (based on user choice) will be downloaded from the NCBI Assembly/NR database and searched for ...

    Tags: GEnView, phylogeny, comparative, genomics, software, analyze, genetic, environment, genes

    858 days ago

  • List of comparative genomics resources !

    3D-GENOMICS -- A Database to Compare Structural and Functional Annotations of Proteins between Sequenced Genomes Compare structural and functional annotations of proteins between sequenced genomes. ARED Organism -- expansion of ARED reveals AU-rich element cluster variations between human...

    Tags: comparative, Genomics, Resources, Tools, Server, Comparative Genomics

    676 days ago

  • Pevzner Lab !

    The laboratory works on genome sequencing, immunoproteogenomics, antibiotics sequencing, and comparative genomics - computational technologies that enabled new applications and allowed scientists to attack biological problems that remained beyond the reach of previous techniques. https://bioal...

    Tags: bioinformatics, algorithms, research, comparative, genomics

    184 days ago