Ancient whole genome duplication (WGD) detection tools !
...DHoRe, you need to register at http:// bioinformatics.psb.ugent.be /webtools/i-adhore/licensing/Agree to the li...to the Ks distribution ksd: Ks distribution construction mcl: BLASP comparison of All-vs-ALl + MCL cla...1168 days ago
Frequently used bioinformatics tools for viral genome analysis !
IVA: accurate de novo assembly of RNA virus genomes. Hunt M, G...roject.org/. RATT: RATT: Rapid Annotation Transfer Tool. Otto, T. D., Dillon, G. P.,...Berriman, M. Nucleic Acids Res. 39, e57 (2011). SAMtools: The Sequence Alignment/Map...1060 days ago
Useful Bioinformatics Analysis Tools !
CoMeta Classificier of reads from metagenomic sequencing experiments. •  ...g on a PC, BMC Bioinformatics, 2013; 14():Article no. 160, Kmer-db Tool for estimation of evolutionar...876 days ago
List of comparative genomics resources !
...b -- a livestock QTL database tool set for positional QTL information...system for cross-species data comparison and transfer of information...logenetic Tree Reconstruction Tool Based on Whole Genomes Construct p...tabase dedicated to biometric comparisons of whole genomes Conduct co...690 days ago
Bioinformatics tools to explore SSRs in genomes !
There are several bioinformatics tools that can be used to explore Simpl...SA (MIcroSAtellite) is a web-based tool that can identify SSRs in DNA...ocator: SSR Locator is a web-based tool that identifies SSRs in both...Primer3: Primer3 is a web-based tool that designs PCR primers for...438 days ago
Common methods to discover tandem repeats
Tandem repeats are DNA sequences that are...m Repeat Finder: Tandem Repeat Finder is a software tool that identifies tandem repeat...used on both nucleotide and protein sequences. The tool uses a statistical algorithm...436 days ago