Hagfish - assess an assembly through creative use of coverage plots
Hagfish is a tool that is to be used in data analysis of Next Generation Sequencing (NGS) experiments. Hagfish builds on the concept of coverage plots and aims to assist (am...2919 days ago
RCircos: an R package for Circos 2D track plots
RCircos package provides a simple and flexible way to make Circos 2D track plots with R a...ng large-scale multi-sample genomic research data. It can also serve as a base tool to generate complex Circos im...2920 days ago
Bpipe - a tool for running and managing bioinformatics pipelines
Bpipe provides a platform for running big bioinformatics jobs that consist of a series of...s! If you use Bpipe, please cite: Sadedin S, Pope B & Oshlack A, Bpipe: A Tool for Running and Managing Bioi...2918 days ago
PolyPhen-2: Prediction of functional effects of human nsSNPs
PolyPhen-2 (Polymorphism Phenotyping v2) is a tool which predicts possible impact of an amino acid substitution on the structure and function of a human protein using straightforward physical and comparative considerations.2917 days ago
2895 days ago
2179 days ago
CNIDARIA: fast, reference-free phylogenomic clustering
Motivation: Identification of biological specimens is a major requirement for a range of...arily large phylogenetic distances. Results: We present Cnidaria, a practical tool for clustering genomic and tr...2892 days ago
2886 days ago
2886 days ago
2830 days ago