2349 days ago
Single Cell RNAseq data analysis tutorial !!
A major breakthrough (replaced microarrays) in the late 00’s and has been widely used since Measures the av...ngle-cell RNA-seq data analyses https://github.com/nghiavtr/BPSC Sincera: A Compu...2349 days ago
Tools for bacterial whole genome annotation
RAST – Web tool (upload contigs), uses the subsystems in the SEED database...ty of genome assemblies created via an assembly software. PAGIT compiled four tools: (i) ABACAS which classifies...2330 days ago
Bioinformatics Web Application Development with Perl
Perl's second wave of adoption came from the gro...n do amazing things with modern Perl tools. If you still think of Perl w...at mess piecemeal, thanks to the new tools and techniques of modern Perl...o APIs for web services, development tools, testing systems, and interfa...2320 days ago
List of visualization tools for network biology
Network analysis is any structured technique...es and/or population level. Few tools published in BMC are listed h...raph Collection of network analysis tools with the emphasis on efficien...a http://tinyurl.com/yEdGraph/ Web tools for network analysis APID&nb...2286 days ago
List of visualization tools for genome alignments
Genome browsers are useful not only for showing final resul...ing are the list of genome alignment visualization tools, which could be useful for an...le single-end and pair-end short reads http://omictools.com/mapview-s1367.html Multi...2282 days ago
Linux Commands Cheat Sheet for Bioinformatics and Computational Biology Professionals
The purpose of this cheat sheet is to introduce biologist and bioinformatician to the frequently used tools for NGS analysis as well as g...2279 days ago
Awk for Bioinformatician and computational biologist
Awk is a programming language which allows easy manipulation of structured data and is mostly used for pattern scanning and processing. It searches one or more files t...2278 days ago
Computational resources for TE discovery and TE detection
...has generated increasing interest in developing new methods for their computational analysis. Following are the...tp://www.ncbi.nlm.nih.gov/CBBresearch/Landsman/TSDfinder/ Tu Lab TE tools http://jaketu.biochem.vt.edu/...2272 days ago
Bioinformatics tools to detect horizontal gene transfer (HGT) in genomes
Horizontal gene transfer (HGT), the “non-sexual movement of genetic material between two organisms” , is relatively common in prokaryotes and single-c...848 days ago