TULIP - The Uncorrected Long read Itegration Pipeline
#Running TULIP (The Uncorrected Long-read Integration Process), version 0.4 late 2016 (European eel) TULIP currently consists of to Perl scripts, tulipseed.perl and tulipbulb.perl. These are...2349 days ago
2331 days ago
Building Web UIs With Mojolicious Perl
Mojolicious is one of 3 leading web frameworks available in the perl ecosystem (along with Dancer...sp;- Web application framework for mod_perl, cgi, etc. Kossy - A We...n one framework. Poet - a modern Perl web framework for Mason devel...2315 days ago
Frontend: Perl Web framework documentation - Andrej Sali Lab
The frontend is a set of Perl classes that displays the web interface, allowing a user to upload their input files, start a job, display a list of all jobs in the system, and get...2302 days ago
mojolicious: a next generation web framework for the Perl programming language.
Back in the early days of the web, many people learned Perl because of a wonderful Perl library called CGI. It was simple...ith RESTful routes, plugins, commands, Perl-ish templates, content negoti...ean, portable and object-oriented pure-Perl API with no hidden magic and...2298 days ago
Circoletto: visualizing sequence similarity with Circos
Circoletto, an online visualization tool based on Circos, which provides a fast, aes...nline version and downloadable software package for offline use (source code in PERL) freely available at htt...2271 days ago
“One code to find them all”: a perl tool to conveniently parse RepeatMasker output files
One code to find them all is a set of perl scripts to extract useful information from RepeatMasker about transposable elements, retrieve their sequences and get some quantitative informa...2156 days ago
RestrictionDigest: A powerful Perl module for simulating genomic restriction digests
RestrictionDigest can simulate the reference genome digestion and generate comprehensive information of the simulation. It can simulate single-enzyme digestion, double...2148 days ago
TULIP - The Uncorrected Long read Integration Pipeline
TULIP currently consists of two Perl scripts, tulipseed.perl and tulipbulb.perl. These are very much intended as prototypes, and additional components and/or implementations are likely to follow....2176 days ago
bpRNA: large-scale automated annotation and analysis of RNA secondary structure
bpRNA, a novel annotation tool capable of parsing RNA structures, including c...ase pairs of each such structural feature. The bpRNA code is written in perl and requires the Graph perl module. Several additional sc...2168 days ago