3961 days ago
3934 days ago
Linux Sort Commands for Bioinformatics
Almost all the scripting languages such as Perl, Python etc have built-in sort, but unfortunately none of them are as flexible as sort command. But one when it come to space efficiency GNU...3640 days ago
3282 days ago
Frequent words problem solution by Perl
Solved with perl http://rosalind.info/problems/1a/ #Find the most frequent k-mers in a string.#Given: A DNA string Text and an integer k.#Return: All most frequent k-mers...3266 days ago
Reverse Complement Problem Solved with Perl
Question at http://rosalind.info/problems/1b/ #Find the reverse complement of a DNA string.#Given: A DNA string Pattern.#Return: Pattern, the reverse complement of Pa...3266 days ago
Pattern Matching Problem Solution with Perl
Problem at http://rosalind.info/problems/1c/ #Find all occurrences of a pattern in a string.#Given: Strings Pattern and Genome.#Return: All starting positions in Geno...3266 days ago
Clump Finding Problem Solved with Perl
The question at http://rosalind.info/problems/1d/ Script are moved to http://bioinformaticsonline.com/snippets/view/34633/clump-finding-problem-solved-with-perl2347 days ago
Genome Assembly Tools and Software - PART2 !!
The genome assemblers generally take a file of short sequ...s. Currently we offer this as a command-line tool in Perl. The input data is given by p...r ParametersVelvetOptimiser is a multi-threaded Perl script for automatically opti...2699 days ago
Awesome perl frameworks, libraries and software - PART 2
...o/p5-Net-DNS-Lite - pure-perl DNS resolver with support for timeout japhb/perl6-bench - Benchmark and c...at will be able to read/write perl storable cosimo/perl5-net-st...d simple interface to fork() dwimperl/dwimperl-linux - Batteries in...2507 days ago