Source Code and Pseudo Code !!
An algorithm is a procedure for solving a problem in terms of the actions to be execut...endif 5. Larger example: NOTE: NEVER ANY DATA DECLARATIONS IN PSEUDOCODE...iscussed ahead) in your pseudocode. Do not include data de...2675 days ago
Quick next generation sequencing (NGS) terms definition
fragment size: the Illumina WGS protocol generates paired-end reads from both ends of longer fragments. The...erefore the fragment size distribution can be learned empirically for each WGS data se...2538 days ago
Awesome perl frameworks, libraries and software - PART 1
A curated list of awesome Perl frameworks, libraries and softwar...nbsp;- Perl binding for Redis database pplu/aws-sdk-perl -...open source repository garu/Data-Printer - colored pretty...ver for the MySQL and MariaDB databases beide/Bootimg-scripts&n...plication that serves KeePass databas...2505 days ago
2505 days ago
Phylogenetic & Molecular Genetics Terms and Definitions
analog -- A feature that appears similar in two taxa which have originated from two different ancestors. ancesto...of coding sequences, for discovery of new genes and (by reference to sequence data ba...2478 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
kallisto Transcript abundance quantification from RNA-seq data (uses pseudoalignment for rap...ference sequences and RNA-seq data (k-mer based) Software (C++)...of transcripts using RNA-seq data (uses k-mers) https://c...aplogroup classifier from NGS data (k-mer based) Software (Pyth...2387 days ago
2367 days ago
Single Cell RNAseq data analysis tutorial !!
A major breakthrough (replaced microarrays) in the late 00’s and...the useful links: Single Cell RNAseq data analysis Tutorial A step-by-...level analysis of single-cell RNA-seq data A step-by-step workflow for...models applied to single-cell RNA-seq data se...2367 days ago
2367 days ago
Tools for bacterial whole genome annotation
RAST – Web tool (upload contigs), uses the subsystems in the SEED database and provides detailed...capable of processing a larger data volume. NCBI's annotati...numbers to the user's sequence data by BLAST searches, respective...achine and supported by updated databas...2348 days ago