Results for "Data Mining & Statistical Study"
Bio-Scripts
Pack a perl program with their dependencies on Ubuntu !
#Follow steps to create your own executable ./web jit@jit-HP-...am is both the question paper & answer key is released......alysis, and interpretation of data for studies in public health a...and applying mathematical and statistical formulas to the factors that...ctural variants in sequencing data...1524 days ago
Commands to install conda in Ubuntu !
jit@jit-HP-Pro-3335-MT:~/Downloads$ mkdir jittmp jit@jit-HP-Pro-3...P ROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PR...alling: html5lib-1.0.1-py37_0 ... installing: importlib_metadata-...1524 days ago
- (base) jit@jit-HP-Pro-3335-MT:~/Downloads/testDock$ docker build -t autocontampr . Sending build context to Docker daemon 9.024MB Step 1/16 : FROM ubuntu:14.04 --...
1455 days ago
- #This method can be applied directly to FASTA or a FASTQ file, compressed or uncompressed files. Seqtk is a fast and lightweight tool for processing biological data...
1415 days ago
Sequence Ids conversion files !
ftp://ftp.ncbi.nlm.nih.gov/gene/DATA/ Name Size Date Modified AR...37 B 09/06/2011, 05:30:00 ftp://ftp.ncbi.nlm.nih.gov/gene/DATA/gene2go.gz ftp://ftp.ncbi.nlm.nih.gov/gene/DATA/...1415 days ago
- (JitMetaENV) ➜ assembly conda install -c bioconda prokka Collecting package metadata (current_repodata.json):...ith flexible solve. Solving environment: failed with repodata...
1228 days ago
Download minikraken database !
(JitMetaENV) ➜ day3 curl -O ftp://ftp.ccb.jhu.edu/pub/data/kraken2_dbs/old/minikraken2...201904_UPDATE/opts.k2d minikraken2_v2_8GB_201904_UPDATE/database100mers.kmer_distrib minikraken2_v2_8GB_201904_UPDATE/datab...1227 days ago
Perl script to check perl modules and download NCBI, BUSCO, Taonomy, Silva databases !
use strict; use warnings; use ExtUtils::Installed; use LWP::Simple;...the system and download the mandatory databa...'Tie::File', 'Try::Tiny', 'Data:...e print "\nDownloading third party database fo...ps://www.arb-silva.de/fileadmin/silva_datab...1173 days ago
- #use strict; use warnings; use ExtUtils::Installed;...stalled in the system and download the mandatory datab...OSIX', 'Tie::File', 'Try::Tiny', 'Data::Dumpe...pt else here print "\nDownloading third party datab...
1171 days ago
Perl script to check modules installed !
#use strict; use warnings; use ExtUtils::Installed; # # First, check if all the required mo...e::chdir', 'File::Copy', 'POSIX', 'Tie::File', 'Try::Tiny', 'Data:...1168 days ago
