Results for "Datasets"
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Comment on "CovCal: Coverage / Read Count Calculator"
...er of reads that covers each base of the reference genome. Estimating the sequencing coverage is very important when you are simulating datasets. The coverage equation is def...599 days ago
Comment on "ncbi-datasets-cli -- Quickstart: command line tools !"
...(base) [jnarayan@hn1 TOOLS]$ curl -o datasets 'https://ftp.ncbi.nlm.nih.gov/pub/datasets/command-line/LATEST/linux-amd...mat 'https://ftp.ncbi.nlm.nih.gov/pub/datasets/command-line/LATEST/linux-amd...(base) [jnarayan@hn1 TOOLS]$ chmod +x datasets dataformat...896 days ago
- Thanks for reporting the updated tool for assembly validation, you can also try following methods/pipelines CEGMA (formally discontinued but still useful) BUSCO...
2947 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
Orthology Detection Combining Clustering and Synteny for Very Large Datasets http://journals.plos.org/plosone/article?id=10.1371/journal.pone.01050153015 days ago
- ...otes A preview release of RStudio v0.99.292 is now available for testing and feedback. Highlights include: Data viewer with support for large datasets, filtering, searching, and so...
3374 days ago
Comment on "List of popular bioinformatics software/tools"
EpiExplorer is a web tool that allows you to use large reference epigenome datasets for your own analysis without complex scripting or laborous preprocessing. http://epiexplorer.mpi-inf.mpg.de/3698 days ago
Comment on "Next Generation Sequencing (NGS) Tutorials"
NGSUtils is a suite of software tools for working with next-generation sequencing datasets. Links http://ngsutils.org/3720 days ago
