Results for "De novo"
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Comparison of Short Read De Novo Alignment Algorithms
Excellent article to introduce different sequencing methods along with tools for de novo assembly of sequencing reads and their relevant references. Title: Comparison of Short Read De Novo Alignment Algorithms Author: Nikhil Gopal3919 days ago
Next Generation Sequencing (NGS) Tutorials
...idPKLxM Variant Detection Introductory tutorial https://docs.google.com/document/pub?id=1ZRzrjjOCvtAu3m-IKL-rbJ1f4On60dDL_IEwG7oejdI Microbial de novo Assembly for Illumina Data In...3496 days ago
- ...or mutations. Assembly Basic Galaxy Tutorial Genome assembly tutorial In this tutorial we carry out de novo assembly of a microbial genome. We have also written a De novo Genome Assembly for Illumina...
3662 days ago
Orione – a web-based framework for NGS analysis in microbiology
End-to-end NGS microbiology data analysis requires a diversity of tools covering bacterial resequencing, de novo assembly, scaffolding, bacterial RNA-Seq, gene annotation and metagen...3583 days ago
Assembly and diploid architecture of an individual human genome via single-molecule technologies
The research work shows that it is now possible to integrate single-molecule and high-throughput sequence data to generate de novo assembled genomes that approach reference quality....3230 days ago
- ...to transfer any entries present on a reference sequence, such as the systematic id or an annotator's notes; such information would be lost in a de novo annotation. More at http://r...
3019 days ago
- ...in most species they are still unknown. Recently, the chromatin conformation assay Hi-C has been re-purposed for diverse applications, including de novo genome assembly, deconvolutio...
3014 days ago
RNA-Seq De novo Assembly Using Trinity
Trinity, developed at the Broad Institute and the Hebrew University of Jerusalem, represents a novel method for the efficient and robust de novo reconstruction of transcriptomes from...2974 days ago
- DISCOVAR is a new variant caller and DISCOVAR de novo a new genome assembler, both designed for state-of-th...lling is under active development and transitioning to VCF. DISCOVAR de novo can generate de novo assembli...
2948 days ago
HOMER: Software for motif discovery and next-gen sequencing analysis
...ence manipulation Mapping reads to a reference genome Manipulating SAM/BAM alignment files Visualizing data in a genome browser RNA-Seq De novo transcript discovery and diff...2940 days ago
